Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS13270

Experiment: plant=Melon; plant sample=MP3; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP3; plant location=NA
2,534,332	+		LU632_RS13265	0.50	-0.8
2,534,333	-		LU632_RS13265	0.50	+0.5
2,534,333	-		LU632_RS13265	0.50	+0.5
2,534,562	+		LU632_RS13265	0.67	-1.0
2,534,605	+		LU632_RS13265	0.71	+0.0
2,534,646	-		LU632_RS13265	0.74	+0.2
2,534,646	-		LU632_RS13265	0.74	+1.0
2,534,646	-		LU632_RS13265	0.74	-0.1
2,534,653	+		LU632_RS13265	0.74	-3.0
2,534,654	-		LU632_RS13265	0.75	+1.2
2,534,654	-		LU632_RS13265	0.75	-1.4
2,534,654	-		LU632_RS13265	0.75	-1.0
2,534,654	-		LU632_RS13265	0.75	+0.2
2,534,661	+		LU632_RS13265	0.75	+2.6
2,534,662	-		LU632_RS13265	0.75	+0.5
2,534,662	-		LU632_RS13265	0.75	-0.8
2,534,700	-		LU632_RS13265	0.78	-1.8
2,534,700	-		LU632_RS13265	0.78	+0.3
2,534,888	+				-2.0
2,534,889	-				+0.4
2,534,890	+				-0.6
2,534,891	-				+0.0
2,535,108	+				-1.9
2,535,108	+				+1.2
2,535,158	+				+0.6
2,535,171	+				-0.0
2,535,188	+				-0.1
2,535,249	-		LU632_RS13270	0.15	+0.1
2,535,349	+		LU632_RS13270	0.49	-0.6
2,535,350	-		LU632_RS13270	0.49	-0.9
2,535,352	+		LU632_RS13270	0.50	-0.8
2,535,394	+		LU632_RS13270	0.64	+0.3
2,535,395	-		LU632_RS13270	0.65	-0.0
2,535,395	-		LU632_RS13270	0.65	-0.4
2,535,395	-		LU632_RS13270	0.65	+0.9
2,535,395	-		LU632_RS13270	0.65	+0.8
2,535,395	-		LU632_RS13270	0.65	+0.2
2,535,395	-		LU632_RS13270	0.65	+2.3
2,535,413	-		LU632_RS13270	0.71	-1.4
2,535,426	+		LU632_RS13270	0.75	+0.0
2,535,426	+		LU632_RS13270	0.75	+0.3
2,535,427	-		LU632_RS13270	0.75	-0.3
2,535,453	+		LU632_RS13270	0.84	-0.1
2,535,459	-		LU632_RS13270	0.86	+0.2
2,535,484	+				+2.4
2,535,646	-		LU632_RS13275	0.45	+0.2
2,535,646	-		LU632_RS13275	0.45	+0.1
2,535,646	-		LU632_RS13275	0.45	+0.2
2,535,703	+		LU632_RS13275	0.61	-0.4
2,535,704	-		LU632_RS13275	0.61	+0.2
2,535,728	+		LU632_RS13275	0.68	+0.2
2,535,795	+		LU632_RS13275	0.88	-0.2
2,535,796	-		LU632_RS13275	0.88	-2.7
2,535,814	-				-0.0
2,535,814	-				+1.0
2,535,870	+				+0.7
2,535,871	-				+1.0
2,535,880	+				+0.1
2,535,913	+		LU632_RS13280	0.10	-0.2
2,536,078	-		LU632_RS13285	0.54	+0.2
2,536,126	+		LU632_RS13285	0.89	+0.7
2,536,305	-				-0.1
2,536,310	+				+1.7
2,536,319	+				+0.0
2,536,324	-				-0.4
2,536,408	-				+0.0