Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS13040

Experiment: plant=Melon; plant sample=MP3; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP3; plant location=NA
2,486,831	-				+1.7
2,486,981	+				-0.3
2,487,058	+				+0.2
2,487,119	-				+0.1
2,487,222	+				+0.3
2,487,223	-				+0.9
2,487,223	-				+0.2
2,487,376	-				-0.1
2,487,387	+		LU632_RS13040	0.11	-2.0
2,487,422	-		LU632_RS13040	0.13	+0.6
2,487,557	+		LU632_RS13040	0.20	+1.0
2,487,557	+		LU632_RS13040	0.20	+1.1
2,487,559	+		LU632_RS13040	0.21	-0.2
2,487,560	-		LU632_RS13040	0.21	+0.2
2,487,560	-		LU632_RS13040	0.21	-0.6
2,487,725	+		LU632_RS13040	0.30	-0.5
2,487,725	+		LU632_RS13040	0.30	+0.0
2,487,798	-		LU632_RS13040	0.34	-1.3
2,487,951	+		LU632_RS13040	0.43	+1.0
2,488,057	+		LU632_RS13040	0.49	-0.6
2,488,057	+		LU632_RS13040	0.49	-0.2
2,488,208	+		LU632_RS13040	0.58	-0.3
2,488,211	-		LU632_RS13040	0.58	+0.6
2,488,245	-		LU632_RS13040	0.60	+0.4
2,488,262	+		LU632_RS13040	0.61	-0.0
2,488,262	+		LU632_RS13040	0.61	-0.0
2,488,315	+		LU632_RS13040	0.64	-0.0
2,488,382	+		LU632_RS13040	0.68	-0.0
2,488,426	+		LU632_RS13040	0.71	-0.3
2,488,426	+		LU632_RS13040	0.71	+0.2
2,488,426	+		LU632_RS13040	0.71	+0.4
2,488,426	+		LU632_RS13040	0.71	+0.1
2,488,426	+		LU632_RS13040	0.71	+0.5
2,488,426	+		LU632_RS13040	0.71	-0.9
2,488,426	+		LU632_RS13040	0.71	-0.5
2,488,427	-		LU632_RS13040	0.71	-0.2
2,488,427	-		LU632_RS13040	0.71	-0.3
2,488,427	-		LU632_RS13040	0.71	-0.3
2,488,427	-		LU632_RS13040	0.71	+1.0
2,488,427	-		LU632_RS13040	0.71	-1.6
2,488,427	-		LU632_RS13040	0.71	+0.7
2,488,427	-		LU632_RS13040	0.71	+1.1
2,488,427	-		LU632_RS13040	0.71	-0.3
2,488,427	-		LU632_RS13040	0.71	+0.6
2,488,511	+		LU632_RS13040	0.76	-0.4
2,488,558	+		LU632_RS13040	0.78	-0.4
2,488,559	-		LU632_RS13040	0.78	-1.2
2,488,561	+		LU632_RS13040	0.79	-0.7
2,488,562	-		LU632_RS13040	0.79	+0.8
2,488,562	-		LU632_RS13040	0.79	-1.3
2,488,766	+				+1.4
2,488,766	+				+0.5
2,488,767	-				-0.0
2,488,829	-				+0.7
2,488,853	+				-0.2
2,488,853	+				+2.0
2,488,854	-				+1.3
2,488,854	-				+1.6
2,488,944	+				-0.5
2,489,017	+				+0.3
2,489,018	-				+0.3
2,489,036	+				-0.0
2,489,036	+				-1.0
2,489,078	+				-1.2
2,489,105	+				-1.1
2,489,105	+				+2.3
2,489,228	+				+0.4
2,489,229	-				-0.0
2,489,231	-				-0.7
2,489,292	-				-2.3
2,489,320	+				+0.4
2,489,321	-				-0.3
2,489,353	+				-1.2
2,489,353	+				+0.8
2,489,384	+				-0.6