Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS12255

Experiment: plant=Melon; plant sample=MP3; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP3; plant location=NA
2,327,442	+		LU632_RS12250	0.76	-0.0
2,327,467	-		LU632_RS12250	0.77	-0.0
2,327,476	-		LU632_RS12250	0.77	-0.6
2,327,493	+		LU632_RS12250	0.78	+1.0
2,327,506	+		LU632_RS12250	0.79	-0.7
2,327,506	+		LU632_RS12250	0.79	-0.2
2,327,531	+		LU632_RS12250	0.80	-0.3
2,327,541	+		LU632_RS12250	0.80	+0.2
2,327,629	-		LU632_RS12250	0.84	+0.7
2,327,670	+		LU632_RS12250	0.86	+0.1
2,327,671	-		LU632_RS12250	0.86	+1.6
2,327,671	-		LU632_RS12250	0.86	-0.4
2,327,674	+		LU632_RS12250	0.86	+0.1
2,327,704	+		LU632_RS12250	0.87	+0.1
2,327,704	+		LU632_RS12250	0.87	+0.2
2,327,704	+		LU632_RS12250	0.87	+0.0
2,327,705	-		LU632_RS12250	0.87	-1.4
2,327,705	-		LU632_RS12250	0.87	+0.3
2,327,810	+				+2.1
2,327,811	-				+2.0
2,327,814	+				-0.0
2,327,843	-				-0.1
2,327,872	+				+0.5
2,328,010	+				-1.5
2,328,011	-				+0.1
2,328,011	-				-1.6
2,328,011	-				-0.7
2,328,084	+				-0.3
2,328,084	+				-0.6
2,328,157	+				+0.3
2,328,158	-				+1.4
2,328,158	-				+0.1
2,328,158	-				+0.5
2,328,158	-				-0.8
2,328,158	-				+1.4
2,328,158	-				+0.6
2,328,159	+				+0.1
2,328,159	+				-0.6
2,328,159	+				-2.8
2,328,159	+				+1.5
2,328,160	-				+0.7
2,328,160	-				-0.6
2,328,160	-				+0.1
2,328,323	+				-0.6
2,328,323	+				-1.0
2,328,363	+				+0.2
2,330,390	+				-0.2
2,330,390	+				-1.9
2,330,391	-				-0.7
2,330,391	-				-0.8
2,330,391	-				+0.6
2,330,393	+				-0.0
2,330,393	+				-0.5
2,330,394	-				-0.1
2,330,394	-				-0.9
2,330,394	-				+0.3
2,330,394	-				-0.4
2,330,395	+				-0.0
2,330,395	+				-0.4
2,330,395	+				-0.4
2,330,396	-				+1.5
2,330,396	-				+0.8
2,330,398	-				-1.0
2,330,398	-				-0.2
2,330,553	-				-0.3
2,330,634	+		LU632_RS12260	0.19	-0.5
2,330,634	+		LU632_RS12260	0.19	-0.7
2,331,112	-				-0.7