Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS09625

Experiment: plant=Melon; plant sample=MP3; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP3; plant location=NA
1,824,095	+				-0.0
1,824,109	-				-1.2
1,824,137	-				-0.8
1,824,137	-				+0.2
1,824,141	-				-0.1
1,824,236	+				-0.1
1,824,236	+				-1.3
1,824,236	+				+0.4
1,824,237	-				-0.5
1,824,237	-				-0.2
1,824,241	+				-0.3
1,824,284	+				-0.9
1,824,284	+				-0.3
1,824,285	-				+0.1
1,824,285	-				-0.5
1,824,303	-				-0.3
1,824,380	-		LU632_RS09620	0.10	-0.5
1,824,582	+		LU632_RS09620	0.67	-1.7
1,824,582	+		LU632_RS09620	0.67	-1.2
1,824,582	+		LU632_RS09620	0.67	-1.0
1,824,582	+		LU632_RS09620	0.67	-0.1
1,824,582	+		LU632_RS09620	0.67	+0.2
1,824,583	-		LU632_RS09620	0.67	+0.7
1,824,583	-		LU632_RS09620	0.67	+0.1
1,824,665	+				-1.2
1,824,669	-				-0.5
1,824,677	+				-0.1
1,824,834	+				-1.9
1,824,923	-				+0.3
1,824,924	+				+0.7
1,824,995	-		LU632_RS09625	0.12	-0.3
1,825,095	-		LU632_RS09625	0.50	+2.7
1,825,122	-		LU632_RS09625	0.60	+0.5
1,825,182	+		LU632_RS09625	0.83	+1.1
1,825,189	+		LU632_RS09625	0.86	-1.5
1,825,328	-				+0.2
1,825,431	+				-0.1
1,825,431	+				+0.0
1,825,432	-				-0.6
1,825,432	-				+0.6
1,825,477	+				-0.1
1,825,477	+				+1.6
1,825,529	+				+0.3
1,825,529	+				+0.9
1,825,564	-				+0.1
1,825,564	-				+0.0
1,825,564	-				-0.5
1,825,569	+				-2.2
1,825,606	-				-0.7
1,825,606	-				-0.8
1,825,614	+				-1.1
1,825,707	+				-0.5
1,825,708	-				+1.8
1,825,717	+				-0.2
1,825,717	+				-1.9
1,825,871	+	nfsA	LU632_RS09630	0.21	-0.3
1,825,926	+	nfsA	LU632_RS09630	0.28	+0.3
1,825,927	-	nfsA	LU632_RS09630	0.28	-1.0
1,825,927	-	nfsA	LU632_RS09630	0.28	+0.6