Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS08050

Experiment: plant=Melon; plant sample=MP3; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP3; plant location=NA
1,508,900	-				-0.2
1,508,940	-				+1.5
1,508,955	-				-0.4
1,508,961	-				-0.0
1,509,246	+		LU632_RS08040	0.85	+0.2
1,509,246	+		LU632_RS08040	0.85	+0.6
1,509,299	+		LU632_RS08045	0.16	+0.8
1,509,402	-		LU632_RS08045	0.49	+2.4
1,509,402	-		LU632_RS08045	0.49	+2.7
1,509,594	-				+0.0
1,509,598	+				-0.2
1,509,598	+				+0.8
1,509,604	-				-1.3
1,509,696	+				-0.8
1,509,706	-				-0.5
1,509,750	+				+0.8
1,509,751	-				+0.5
1,509,756	-				+1.3
1,509,769	-				+0.7
1,509,788	+				-0.5
1,509,808	-				-0.9
1,509,837	-				+0.8
1,509,948	-		LU632_RS08050	0.13	+0.5
1,509,995	-		LU632_RS08050	0.23	-0.4
1,510,023	+		LU632_RS08050	0.28	-1.0
1,510,167	+		LU632_RS08050	0.58	+1.1
1,510,167	+		LU632_RS08050	0.58	-1.2
1,510,201	+		LU632_RS08050	0.64	-0.2
1,510,423	-				-2.6
1,510,455	+				-0.2
1,510,456	-				+1.0
1,510,471	+				+1.6