Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS07080

Experiment: plant=Melon; plant sample=MP3; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP3; plant location=NA
1,341,916	-		LU632_RS07070	0.11	+1.6
1,342,059	-		LU632_RS07070	0.39	-0.8
1,342,095	-		LU632_RS07070	0.46	+0.3
1,342,236	-		LU632_RS07070	0.73	-1.4
1,342,236	-		LU632_RS07070	0.73	-0.4
1,342,417	+				-0.3
1,342,607	+		LU632_RS07075	0.21	-0.1
1,342,625	+		LU632_RS07075	0.27	-1.6
1,342,625	+		LU632_RS07075	0.27	-0.4
1,342,625	+		LU632_RS07075	0.27	-1.1
1,342,625	+		LU632_RS07075	0.27	+0.6
1,342,625	+		LU632_RS07075	0.27	-1.4
1,342,627	+		LU632_RS07075	0.28	+0.2
1,342,628	-		LU632_RS07075	0.28	-1.2
1,342,628	-		LU632_RS07075	0.28	-1.1
1,342,748	-		LU632_RS07075	0.67	-0.1
1,342,748	-		LU632_RS07075	0.67	+1.3
1,342,748	-		LU632_RS07075	0.67	-1.0
1,342,751	+		LU632_RS07075	0.68	+0.8
1,342,752	-		LU632_RS07075	0.68	-1.1
1,342,755	-		LU632_RS07075	0.69	+0.1
1,342,755	-		LU632_RS07075	0.69	+0.4
1,342,755	-		LU632_RS07075	0.69	+0.7
1,342,890	+				-0.3
1,342,890	+				+1.9
1,342,891	-				-1.6
1,342,891	-				+0.5
1,342,891	-				-1.4
1,342,891	-				-0.6
1,342,891	-				+0.4
1,342,975	-		LU632_RS07080	0.17	+0.2
1,342,991	-		LU632_RS07080	0.20	+0.1
1,342,991	-		LU632_RS07080	0.20	+0.5
1,342,994	+		LU632_RS07080	0.21	+0.2
1,343,123	-		LU632_RS07080	0.47	-1.4
1,343,123	-		LU632_RS07080	0.47	+0.4
1,343,123	-		LU632_RS07080	0.47	-0.1
1,343,252	+		LU632_RS07080	0.74	-2.1
1,343,276	+		LU632_RS07080	0.79	-0.1
1,343,278	+		LU632_RS07080	0.79	-1.7
1,343,278	+		LU632_RS07080	0.79	+0.6
1,343,278	+		LU632_RS07080	0.79	+0.1
1,343,278	+		LU632_RS07080	0.79	-0.1
1,343,279	-		LU632_RS07080	0.79	-2.6
1,343,279	-		LU632_RS07080	0.79	-1.2
1,343,286	+		LU632_RS07080	0.81	-0.6
1,343,318	+		LU632_RS07080	0.87	+1.5
1,343,353	-				-0.6
1,343,354	+				-1.8
1,343,355	-				-0.4
1,343,355	-				-0.8
1,343,382	+				-0.4
1,343,382	+				+0.1
1,343,407	+				-2.4
1,343,438	+		LU632_RS07085	0.15	-0.1
1,343,439	-		LU632_RS07085	0.15	-0.3
1,343,439	-		LU632_RS07085	0.15	+0.1
1,343,439	-		LU632_RS07085	0.15	+0.7
1,343,439	-		LU632_RS07085	0.15	-0.3
1,343,439	-		LU632_RS07085	0.15	+0.2
1,343,480	-		LU632_RS07085	0.25	+1.2
1,343,532	-		LU632_RS07085	0.37	+2.2
1,343,532	-		LU632_RS07085	0.37	-0.4
1,343,694	-		LU632_RS07085	0.75	+0.1
1,343,729	+		LU632_RS07085	0.83	+1.1
1,343,729	+		LU632_RS07085	0.83	+0.2
1,343,729	+		LU632_RS07085	0.83	-0.2
1,343,729	+		LU632_RS07085	0.83	+0.9
1,343,730	-		LU632_RS07085	0.83	+0.8
1,343,730	-		LU632_RS07085	0.83	+1.6
1,343,730	-		LU632_RS07085	0.83	+1.2
1,343,730	-		LU632_RS07085	0.83	-0.7
1,343,869	+				-1.1
1,343,873	+				-1.7
1,343,873	+				-0.8
1,343,874	-				-0.8
1,343,874	-				+0.8
1,343,974	+				-1.1
1,344,146	-		LU632_RS07090	0.77	+1.7
1,344,206	-				+0.4
1,344,230	-				-1.3
1,344,271	-				-0.1
1,344,271	-				+0.0
1,344,272	+				+1.2
1,344,273	-				+0.8