Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS24370

Experiment: plant=Melon; plant sample=MP2; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP2; plant location=NA
4,646,798	-				+0.7
4,649,149	+				+1.6
4,649,203	-				-0.2
4,649,363	-	tnpA	LU632_RS24380	0.60	+1.4
4,649,363	-	tnpA	LU632_RS24380	0.60	-0.1
4,649,375	-	tnpA	LU632_RS24380	0.64	+0.4
4,649,430	+	tnpA	LU632_RS24380	0.81	-0.6
4,649,440	+	tnpA	LU632_RS24380	0.85	-0.2
4,649,450	+	tnpA	LU632_RS24380	0.88	+1.5
4,649,451	-	tnpA	LU632_RS24380	0.88	+0.2
4,649,451	-	tnpA	LU632_RS24380	0.88	+1.5
4,649,451	-	tnpA	LU632_RS24380	0.88	-1.4
4,649,453	-	tnpA	LU632_RS24380	0.89	-0.2
4,649,453	-	tnpA	LU632_RS24380	0.89	+0.5
4,649,453	-	tnpA	LU632_RS24380	0.89	+2.0
4,649,455	-	tnpA	LU632_RS24380	0.90	+1.1
4,649,455	-	tnpA	LU632_RS24380	0.90	-2.9
4,649,455	-	tnpA	LU632_RS24380	0.90	+0.8
4,649,683	+				-0.0
4,649,683	+				+0.1
4,649,703	+				-1.1
4,649,703	+				-2.4
4,649,703	+				+0.9
4,649,704	-				-1.1
4,649,704	-				-0.6