Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS24120

Experiment: plant=Melon; plant sample=MP2; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP2; plant location=NA
4,599,985	-				+0.7
4,599,987	-				+2.1
4,599,987	-				+2.1
4,600,110	+				-0.4
4,600,129	+				-1.3
4,600,130	-				-0.8
4,600,130	-				-0.5
4,600,130	-				-0.0
4,600,130	-				-0.4
4,600,262	+		LU632_RS24120	0.30	+0.4
4,600,262	+		LU632_RS24120	0.30	+2.0
4,600,262	+		LU632_RS24120	0.30	-0.3
4,600,262	+		LU632_RS24120	0.30	+0.9
4,600,262	+		LU632_RS24120	0.30	+0.2
4,600,262	+		LU632_RS24120	0.30	+3.7
4,600,262	+		LU632_RS24120	0.30	+0.4
4,600,262	+		LU632_RS24120	0.30	-0.5
4,600,262	+		LU632_RS24120	0.30	-0.3
4,600,262	+		LU632_RS24120	0.30	-0.7
4,600,262	+		LU632_RS24120	0.30	+0.7
4,600,262	+		LU632_RS24120	0.30	-0.8
4,600,262	+		LU632_RS24120	0.30	+0.3
4,600,263	+		LU632_RS24120	0.30	+0.1
4,600,263	-		LU632_RS24120	0.30	+0.3
4,600,263	-		LU632_RS24120	0.30	-0.6
4,600,263	-		LU632_RS24120	0.30	+0.7
4,600,263	-		LU632_RS24120	0.30	-0.1
4,600,263	-		LU632_RS24120	0.30	-0.3
4,600,263	-		LU632_RS24120	0.30	+0.4
4,600,263	-		LU632_RS24120	0.30	-0.4
4,600,263	-		LU632_RS24120	0.30	-1.2
4,600,263	-		LU632_RS24120	0.30	-0.0
4,600,263	-		LU632_RS24120	0.30	-1.3
4,600,263	-		LU632_RS24120	0.30	-0.5
4,600,263	-		LU632_RS24120	0.30	-1.5
4,600,263	-		LU632_RS24120	0.30	+0.1
4,600,263	-		LU632_RS24120	0.30	+1.3
4,600,263	-		LU632_RS24120	0.30	-1.8
4,600,263	-		LU632_RS24120	0.30	+0.8
4,600,263	-		LU632_RS24120	0.30	+0.5
4,600,263	-		LU632_RS24120	0.30	+1.2
4,600,263	-		LU632_RS24120	0.30	-0.3
4,600,264	+		LU632_RS24120	0.30	+0.1
4,600,389	+		LU632_RS24120	0.57	+1.4
4,600,475	+		LU632_RS24120	0.75	-1.3
4,600,549	-				-1.7
4,600,633	+				+2.2
4,600,777	+				-1.2
4,600,777	+				+1.3
4,600,778	-				+0.3
4,600,924	-				-2.5
4,600,992	+				-2.4
4,600,993	-				+0.3