Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS23430

Experiment: plant=Melon; plant sample=MP2; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP2; plant location=NA
4,471,342	+				+0.5
4,471,349	+				+0.0
4,471,384	+				+2.2
4,471,390	-				+0.6
4,471,606	+		LU632_RS23430	0.18	+3.1
4,471,685	+		LU632_RS23430	0.27	+1.0
4,471,871	+		LU632_RS23430	0.50	-2.6
4,471,872	-		LU632_RS23430	0.50	+0.1
4,471,873	+		LU632_RS23430	0.50	-0.6
4,471,874	-		LU632_RS23430	0.51	+0.8
4,471,874	-		LU632_RS23430	0.51	+1.7
4,471,881	-		LU632_RS23430	0.51	-1.5
4,471,895	+		LU632_RS23430	0.53	+0.9
4,471,895	+		LU632_RS23430	0.53	+0.1
4,471,896	-		LU632_RS23430	0.53	+0.2
4,471,970	-		LU632_RS23430	0.62	+0.4
4,471,980	-		LU632_RS23430	0.64	+0.5
4,472,067	+		LU632_RS23430	0.74	+1.1
4,472,073	-		LU632_RS23430	0.75	+0.6
4,472,097	+		LU632_RS23430	0.78	+0.5
4,472,097	+		LU632_RS23430	0.78	+0.1
4,472,099	+		LU632_RS23430	0.78	+1.1
4,472,100	-		LU632_RS23430	0.78	-0.0
4,472,100	-		LU632_RS23430	0.78	+0.6
4,472,103	-		LU632_RS23430	0.79	-0.7
4,472,153	-		LU632_RS23430	0.85	-1.1
4,472,153	-		LU632_RS23430	0.85	+1.1
4,472,157	-		LU632_RS23430	0.85	-0.1
4,472,168	-		LU632_RS23430	0.87	+4.4
4,472,243	+				+0.2
4,472,243	+				-0.3
4,472,338	-				-0.2
4,472,338	-				-0.8
4,472,338	-				+1.1
4,472,340	-				-2.4
4,472,410	-				+0.5
4,472,410	-				+1.3