Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS22910

Experiment: plant=Melon; plant sample=MP2; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP2; plant location=NA
4,361,551	-				-0.3
4,361,627	+				+0.9
4,361,627	+				+0.1
4,361,628	-				+0.6
4,361,628	-				+0.6
4,362,316	+				-2.1
4,362,320	-				+0.8
4,362,417	-	nudE	LU632_RS22910	0.11	+0.7
4,362,417	-	nudE	LU632_RS22910	0.11	+1.9
4,362,461	+	nudE	LU632_RS22910	0.19	-1.3
4,362,524	-	nudE	LU632_RS22910	0.30	-0.2
4,362,524	-	nudE	LU632_RS22910	0.30	+0.4
4,362,525	+	nudE	LU632_RS22910	0.30	-0.6
4,362,526	-	nudE	LU632_RS22910	0.30	+0.0
4,362,566	-	nudE	LU632_RS22910	0.37	-2.7
4,362,566	-	nudE	LU632_RS22910	0.37	-1.1
4,362,745	+	nudE	LU632_RS22910	0.69	+0.1
4,362,805	+	nudE	LU632_RS22910	0.80	-0.5
4,362,806	-	nudE	LU632_RS22910	0.80	+1.1
4,362,807	+	nudE	LU632_RS22910	0.80	-0.9
4,362,807	+	nudE	LU632_RS22910	0.80	-0.0
4,362,808	-	nudE	LU632_RS22910	0.80	+0.9
4,362,808	-	nudE	LU632_RS22910	0.80	-1.2
4,362,808	-	nudE	LU632_RS22910	0.80	-0.4
4,362,808	-	nudE	LU632_RS22910	0.80	-0.7
4,362,808	-	nudE	LU632_RS22910	0.80	+2.7
4,362,808	-	nudE	LU632_RS22910	0.80	-0.2
4,362,888	-				-1.8
4,362,920	+				+0.0
4,362,933	+				+0.7
4,362,934	-				+1.6
4,362,944	-				-0.2
4,362,953	-				+0.7
4,362,973	+				+0.1
4,362,986	+				-2.2
4,363,045	-				-0.6
4,363,112	-				-0.6
4,363,112	-				-0.3
4,363,118	-				+0.6
4,363,152	-				+0.8
4,363,174	-				+0.2
4,363,220	+				-0.4
4,363,221	-				+0.2
4,363,293	+				-2.1