Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS22070

Experiment: plant=Melon; plant sample=MP2; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP2; plant location=NA
4,214,434	+				+0.0
4,214,453	-				+0.7
4,214,566	+				-2.4
4,214,714	+				-0.7
4,214,765	-				+0.0
4,214,889	+				-1.0
4,214,900	+				-0.0
4,215,001	-		LU632_RS22070	0.11	+1.6
4,215,093	-		LU632_RS22070	0.34	+0.6
4,215,093	-		LU632_RS22070	0.34	+0.6
4,215,329	-				-1.7
4,215,330	+				-1.5
4,215,330	+				-1.3
4,215,352	+				-0.1
4,215,515	-				+0.4
4,215,523	+				+0.4
4,215,526	-				-0.6
4,215,526	-				+0.7
4,215,556	+				+0.5
4,215,559	+				+1.0
4,215,579	+				+0.5
4,215,580	-				+0.2
4,215,606	-				+0.8
4,215,643	+				-0.7
4,215,647	+				+1.4
4,215,666	+				-0.7
4,215,669	+				-1.3
4,215,876	+		LU632_RS22075	0.26	-0.2
4,215,881	-		LU632_RS22075	0.27	-1.0
4,215,989	+		LU632_RS22075	0.41	+0.3
4,215,994	-		LU632_RS22075	0.41	-0.8
4,216,025	+		LU632_RS22075	0.45	+0.3
4,216,058	-		LU632_RS22075	0.49	-0.6
4,216,068	+		LU632_RS22075	0.51	-0.7
4,216,069	-		LU632_RS22075	0.51	-2.0
4,216,097	+		LU632_RS22075	0.54	+1.0
4,216,097	+		LU632_RS22075	0.54	-0.5
4,216,098	-		LU632_RS22075	0.54	+0.9
4,216,120	+		LU632_RS22075	0.57	-2.3
4,216,120	+		LU632_RS22075	0.57	+1.0
4,216,200	+		LU632_RS22075	0.67	+0.7
4,216,201	-		LU632_RS22075	0.68	+1.4
4,216,202	+		LU632_RS22075	0.68	-0.4
4,216,202	+		LU632_RS22075	0.68	-0.7
4,216,311	+		LU632_RS22075	0.82	-1.0
4,216,312	-		LU632_RS22075	0.82	+1.8