Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS18865

Experiment: plant=Melon; plant sample=MP2; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP2; plant location=NA
3,557,256	+		LU632_RS18855	0.74	-1.5
3,557,256	+		LU632_RS18855	0.74	-0.6
3,557,261	-		LU632_RS18855	0.75	+0.5
3,557,268	+		LU632_RS18855	0.76	+1.2
3,557,268	+		LU632_RS18855	0.76	-0.1
3,557,269	-		LU632_RS18855	0.76	+0.5
3,557,301	-		LU632_RS18855	0.80	-0.5
3,557,352	-		LU632_RS18855	0.88	-0.2
3,557,372	-				-0.5
3,557,373	+				-1.1
3,557,375	+				+0.5
3,557,376	-				+3.0
3,557,376	-				+0.3
3,557,376	-				-0.1
3,557,430	-				+1.2
3,557,505	+				-0.4
3,557,514	+				-0.3
3,557,515	-				-0.3
3,557,515	-				+0.7
3,558,280	+	tnpA	LU632_RS18865	0.38	-1.9
3,558,292	+	tnpA	LU632_RS18865	0.42	-0.4
3,558,330	-	tnpA	LU632_RS18865	0.56	-1.4
3,558,507	-				-0.3
3,558,563	+				-1.9
3,558,563	+				-1.3
3,558,563	+				-0.4
3,558,564	-				-2.1