Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS18035

Experiment: plant=Melon; plant sample=MP2; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP2; plant location=NA
3,407,048	-				-0.1
3,407,146	+				+0.8
3,407,156	-				-0.4
3,407,176	-				-0.8
3,407,183	-				+1.1
3,407,185	+				+0.3
3,407,202	+				-1.2
3,407,263	+				+0.3
3,407,299	+				+1.1
3,407,300	-				-0.2
3,407,499	+		LU632_RS18030	0.65	+0.2
3,407,603	+				-1.1
3,407,606	+				+0.5
3,407,606	+				-1.1
3,407,606	+				+0.1
3,407,607	-				-0.2
3,407,608	+				-0.5
3,407,609	-				-0.1
3,407,617	+				-0.2
3,407,617	+				+2.6
3,407,853	+				+2.4
3,407,863	-				-0.5
3,407,943	-				-1.5
3,408,023	+				+0.4
3,408,023	+				+1.0
3,408,081	+				+0.5
3,408,087	-				-0.9
3,408,126	-		LU632_RS18040	0.17	+1.3
3,408,127	+		LU632_RS18040	0.17	-0.2
3,408,128	-		LU632_RS18040	0.18	+1.2
3,408,199	-		LU632_RS18040	0.34	-0.5
3,408,202	+		LU632_RS18040	0.34	-2.5
3,408,202	+		LU632_RS18040	0.34	-0.9
3,408,203	-		LU632_RS18040	0.34	+0.2
3,408,352	+		LU632_RS18040	0.68	+0.9