Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS16745

Experiment: plant=Melon; plant sample=MP2; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP2; plant location=NA
3,154,762	+				-0.5
3,154,762	+				-1.9
3,154,762	+				-0.8
3,154,799	+				+1.3
3,154,800	-				+0.6
3,154,800	-				-0.2
3,154,811	+				+0.2
3,154,811	+				+1.0
3,154,811	+				-1.7
3,154,812	-				+0.9
3,154,821	-				+0.0
3,154,849	+				-1.4
3,155,328	+		LU632_RS16735	0.73	-1.7
3,155,383	-		LU632_RS16735	0.83	-0.0
3,155,626	+		LU632_RS16745	0.16	+1.5
3,155,746	+		LU632_RS16745	0.80	-2.4
3,155,748	-		LU632_RS16745	0.81	+0.8
3,155,933	+				+0.2
3,155,934	-				-0.1
3,155,936	+				+0.4
3,155,936	+				-0.2
3,156,022	+				+0.5
3,156,022	+				-1.0
3,156,023	-				+0.1
3,156,023	-				-0.1
3,156,178	-				+0.9
3,156,178	-				-0.3
3,156,178	-				-0.1
3,156,178	-				-0.5
3,156,181	-				-1.5
3,156,292	-		LU632_RS16755	0.20	-0.5
3,156,295	+		LU632_RS16755	0.20	+1.0
3,156,317	+		LU632_RS16755	0.24	+0.7
3,156,318	-		LU632_RS16755	0.24	+1.5
3,156,390	+		LU632_RS16755	0.37	+2.1
3,156,391	-		LU632_RS16755	0.37	+0.0
3,156,417	+		LU632_RS16755	0.42	-0.8
3,156,418	-		LU632_RS16755	0.42	+0.9