Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS16550

Experiment: plant=Melon; plant sample=MP2; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP2; plant location=NA
3,133,192	+				-0.2
3,133,196	+				-1.8
3,133,199	+		LU632_RS16535	0.11	+2.0
3,133,215	+		LU632_RS16535	0.18	+0.6
3,133,216	-		LU632_RS16535	0.19	-1.0
3,133,263	+		LU632_RS16535	0.40	+0.5
3,133,263	+		LU632_RS16535	0.40	+0.1
3,133,263	+		LU632_RS16535	0.40	+3.6
3,133,366	-		LU632_RS16535	0.87	+0.3
3,133,366	-		LU632_RS16535	0.87	+2.1
3,133,366	-		LU632_RS16535	0.87	+1.0
3,133,366	-		LU632_RS16535	0.87	+0.6
3,133,499	+		LU632_RS16540	0.35	+0.4
3,133,499	+		LU632_RS16540	0.35	-0.3
3,133,500	-		LU632_RS16540	0.35	-0.9
3,133,648	+				+0.0
3,133,648	+				-0.9
3,133,928	+		LU632_RS16545	0.54	-1.1
3,134,035	+		LU632_RS16545	0.73	-0.2
3,134,035	+		LU632_RS16545	0.73	+5.3
3,134,035	+		LU632_RS16545	0.73	-2.2
3,134,035	+		LU632_RS16545	0.73	+0.7
3,134,036	-		LU632_RS16545	0.73	+2.5
3,134,323	-		LU632_RS16550	0.79	-1.2
3,134,326	-		LU632_RS16550	0.81	-1.4
3,134,461	+		LU632_RS16555	0.22	-0.3
3,134,473	-		LU632_RS16555	0.28	+0.3
3,134,513	+		LU632_RS16555	0.48	+0.7
3,134,735	+		LU632_RS16560	0.30	+1.3
3,134,736	-		LU632_RS16560	0.30	-0.8
3,134,877	+		LU632_RS16560	0.71	-0.7
3,135,090	+		LU632_RS16565	0.68	+0.7
3,135,091	-		LU632_RS16565	0.68	-1.5
3,135,114	-		LU632_RS16565	0.80	-1.8
3,135,283	+		LU632_RS16570	0.45	+0.3