Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS15335

Experiment: plant=Melon; plant sample=MP2; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP2; plant location=NA
2,903,581	+		LU632_RS15320	0.69	+1.1
2,903,583	+		LU632_RS15320	0.69	-0.2
2,903,683	+		LU632_RS15320	0.79	+0.5
2,903,754	+		LU632_RS15320	0.86	-0.3
2,903,754	+		LU632_RS15320	0.86	+0.1
2,903,755	-		LU632_RS15320	0.86	-0.9
2,903,769	-		LU632_RS15320	0.87	-1.7
2,903,772	+		LU632_RS15320	0.88	-0.6
2,903,772	+		LU632_RS15320	0.88	-3.2
2,903,772	+		LU632_RS15320	0.88	-0.7
2,903,772	+		LU632_RS15320	0.88	+2.1
2,903,773	-		LU632_RS15320	0.88	+0.7
2,903,773	-		LU632_RS15320	0.88	+1.5
2,903,774	+		LU632_RS15320	0.88	+1.5
2,903,775	-		LU632_RS15320	0.88	+0.7
2,903,838	-				-0.1
2,904,056	-		LU632_RS15325	0.44	-0.5
2,904,056	-		LU632_RS15325	0.44	+0.6
2,904,106	-		LU632_RS15325	0.57	-0.3
2,904,276	+				-0.6
2,904,291	+				+3.6
2,904,448	+		LU632_RS15330	0.70	-0.0
2,904,550	-				+0.5
2,905,398	+		LU632_RS15335	0.86	+0.3
2,905,399	-		LU632_RS15335	0.86	-2.2
2,905,431	+		LU632_RS15335	0.89	-1.1
2,905,437	-				+3.6
2,905,474	-				+1.3
2,905,487	-				-0.2
2,905,553	-				-0.3
2,905,553	-				-1.2
2,905,553	-				+0.5
2,905,709	-				-0.2
2,905,905	+				-1.2
2,906,120	+				+0.9