Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS14790

Experiment: plant=Melon; plant sample=MP2; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP2; plant location=NA
2,810,413	-				+3.7
2,810,522	+				-0.3
2,810,531	+				-1.0
2,810,532	-				-0.7
2,810,557	-				+0.3
2,810,563	-				-2.4
2,810,572	+				+0.3
2,810,572	+				+1.3
2,810,572	+				+2.0
2,810,693	+		LU632_RS14785	0.13	-1.4
2,810,693	+		LU632_RS14785	0.13	+0.2
2,810,693	+		LU632_RS14785	0.13	-2.1
2,810,694	-		LU632_RS14785	0.13	+0.8
2,810,695	+		LU632_RS14785	0.13	+1.0
2,810,695	+		LU632_RS14785	0.13	-1.2
2,810,696	-		LU632_RS14785	0.13	+1.9
2,810,696	-		LU632_RS14785	0.13	+1.2
2,810,696	-		LU632_RS14785	0.13	-0.8
2,810,716	+		LU632_RS14785	0.16	-1.6
2,810,717	-		LU632_RS14785	0.16	+1.0
2,810,762	-		LU632_RS14785	0.22	+2.0
2,810,782	-		LU632_RS14785	0.24	-2.9
2,810,803	+		LU632_RS14785	0.27	+0.9
2,810,803	+		LU632_RS14785	0.27	-1.7
2,810,803	+		LU632_RS14785	0.27	-1.0
2,810,803	+		LU632_RS14785	0.27	+1.2
2,810,804	-		LU632_RS14785	0.27	-0.3
2,810,864	+		LU632_RS14785	0.35	+1.2
2,810,866	+		LU632_RS14785	0.35	+0.2
2,810,973	-		LU632_RS14785	0.48	+0.6
2,811,035	+		LU632_RS14785	0.56	+0.7
2,811,036	-		LU632_RS14785	0.56	+0.0
2,811,088	+		LU632_RS14785	0.63	-0.5
2,811,177	+		LU632_RS14785	0.74	+2.9
2,811,178	-		LU632_RS14785	0.74	-1.0
2,811,199	+		LU632_RS14785	0.77	-1.6
2,811,199	+		LU632_RS14785	0.77	-1.8
2,811,200	-		LU632_RS14785	0.77	-0.4
2,811,200	-		LU632_RS14785	0.77	-0.2
2,811,244	+		LU632_RS14785	0.82	-0.4
2,811,276	-		LU632_RS14785	0.86	-1.1
2,811,309	+				+0.9
2,811,310	-				+0.3
2,811,340	+				+0.2
2,811,387	+				+0.4
2,811,387	+				-0.2
2,811,387	+				+0.7
2,811,388	-				-1.1
2,811,388	-				+0.5
2,813,118	-	yceG	LU632_RS14800	0.11	+1.0