Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS14415

Experiment: plant=Melon; plant sample=MP2; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP2; plant location=NA
2,747,771	-		LU632_RS14410	0.26	-3.9
2,747,839	-		LU632_RS14410	0.38	-0.1
2,747,947	-		LU632_RS14410	0.58	-2.4
2,747,957	-		LU632_RS14410	0.60	-0.4
2,748,009	+		LU632_RS14410	0.70	-0.1
2,748,009	+		LU632_RS14410	0.70	-0.6
2,748,009	+		LU632_RS14410	0.70	+1.4
2,748,009	+		LU632_RS14410	0.70	+0.1
2,748,010	-		LU632_RS14410	0.70	+1.4
2,748,039	+		LU632_RS14410	0.75	-0.8
2,748,040	-		LU632_RS14410	0.76	-2.8
2,748,040	-		LU632_RS14410	0.76	-2.8
2,748,043	+		LU632_RS14410	0.76	-0.4
2,748,043	+		LU632_RS14410	0.76	-0.7
2,748,043	+		LU632_RS14410	0.76	-2.5
2,748,116	+		LU632_RS14410	0.90	-0.1
2,748,160	+				+0.6
2,748,160	+				-0.5
2,748,161	-				+0.6
2,748,163	+				+0.9
2,748,163	+				+0.3
2,748,163	+				+0.3
2,748,163	+				+1.8
2,748,163	+				+5.1
2,748,164	-				-0.0
2,748,164	-				+0.0
2,748,164	-				+2.4
2,748,167	-				+4.7
2,748,183	-				+2.1
2,748,200	-				+0.6
2,748,201	-				-1.8
2,748,201	-				+0.8
2,748,204	+				+4.5
2,748,205	-				-0.4
2,748,264	-				+0.6
2,748,276	+				+0.2
2,748,294	-				+0.4
2,748,313	+				+0.4
2,748,326	-				+0.2
2,748,352	-				+0.9
2,748,477	+				-0.1
2,748,533	-				-0.2
2,748,542	-				-1.6
2,748,582	+				-0.3
2,748,588	+				+0.4
2,748,874	+		LU632_RS14415	0.24	-2.7
2,748,875	-		LU632_RS14415	0.24	-1.6
2,749,093	+		LU632_RS14415	0.65	-0.7
2,749,238	+				-0.5
2,749,239	-				+0.2
2,749,239	-				+0.2
2,749,329	+		LU632_RS14420	0.11	-0.4
2,749,533	+		LU632_RS14420	0.61	+0.9
2,749,600	+		LU632_RS14420	0.77	+0.4
2,749,601	-		LU632_RS14420	0.77	+1.6
2,749,606	+		LU632_RS14420	0.78	+0.6
2,749,606	+		LU632_RS14420	0.78	-2.4
2,749,607	-		LU632_RS14420	0.79	+1.2
2,749,622	+		LU632_RS14420	0.82	-0.4
2,749,695	+				-0.8
2,749,696	-				-0.2
2,749,696	-				+0.0
2,749,827	-		LU632_RS14425	0.41	+0.6
2,749,827	-		LU632_RS14425	0.41	-0.8
2,749,835	-		LU632_RS14425	0.44	+1.2
2,749,889	+		LU632_RS14425	0.60	-0.3
2,749,889	+		LU632_RS14425	0.60	-3.1
2,749,890	-		LU632_RS14425	0.60	-0.2
2,749,971	-		LU632_RS14425	0.84	-1.6
2,750,092	+				-1.2
2,750,100	+				+0.6
2,750,100	+				-1.7
2,750,101	-				-0.6
2,750,101	-				-0.8