Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS14290

Experiment: plant=Melon; plant sample=MP2; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP2; plant location=NA
2,732,816	+				+0.3
2,732,816	+				+0.5
2,732,816	+				+0.6
2,732,816	+				-0.9
2,732,817	-				-3.2
2,732,817	-				+1.2
2,733,019	-				+0.5
2,733,142	+		LU632_RS14280	0.16	+1.2
2,733,154	+		LU632_RS14280	0.19	+1.5
2,733,273	+		LU632_RS14280	0.52	-0.4
2,733,274	-		LU632_RS14280	0.53	-0.2
2,733,314	-		LU632_RS14280	0.64	-0.5
2,733,533	-		LU632_RS14285	0.39	+0.6
2,733,533	-		LU632_RS14285	0.39	+0.4
2,733,533	-		LU632_RS14285	0.39	+0.1
2,733,570	-		LU632_RS14285	0.55	-0.2
2,733,712	-				-1.1
2,733,770	+		LU632_RS14290	0.18	-0.0
2,733,804	+		LU632_RS14290	0.31	+1.4
2,733,805	-		LU632_RS14290	0.31	+1.4
2,734,655	+				-0.7
2,734,785	+				-2.5
2,734,785	+				+0.7
2,734,785	+				-1.7
2,734,795	+				+1.9
2,734,795	+				-0.1
2,734,801	+				+0.2
2,734,802	-				-0.6
2,734,906	+		LU632_RS14300	0.19	+0.4
2,734,906	+		LU632_RS14300	0.19	-0.6
2,734,915	-		LU632_RS14300	0.21	-0.1