Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS13885

Experiment: plant=Melon; plant sample=MP2; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP2; plant location=NA
2,661,660	-		LU632_RS13875	0.58	-2.0
2,661,897	-				+0.7
2,662,095	-				+1.0
2,662,305	+		LU632_RS13880	0.58	-2.1
2,662,305	+		LU632_RS13880	0.58	+0.5
2,662,305	+		LU632_RS13880	0.58	-0.6
2,662,394	+		LU632_RS13880	0.79	-0.9
2,662,682	+		LU632_RS13885	0.81	+0.3
2,662,683	-		LU632_RS13885	0.81	-2.2
2,662,683	-		LU632_RS13885	0.81	-1.4
2,662,824	-		LU632_RS13890	0.42	-1.7
2,662,826	-		LU632_RS13890	0.43	+0.3
2,662,899	+		LU632_RS13890	0.80	+0.5
2,662,899	+		LU632_RS13890	0.80	+0.2
2,662,899	+		LU632_RS13890	0.80	-2.9
2,662,900	-		LU632_RS13890	0.81	-0.7
2,662,900	-		LU632_RS13890	0.81	+0.2
2,662,900	-		LU632_RS13890	0.81	-0.4
2,662,900	-		LU632_RS13890	0.81	+1.7
2,662,941	+				+0.4
2,662,942	-				-2.0
2,663,144	+				+0.1
2,663,145	-				-0.2
2,663,258	-				-0.1
2,663,259	+				-1.2
2,663,260	-				-1.2
2,663,490	+		LU632_RS13895	0.37	-1.4
2,663,491	-		LU632_RS13895	0.37	-2.3
2,663,581	+		LU632_RS13895	0.51	-0.8
2,663,581	+		LU632_RS13895	0.51	+1.5
2,663,581	+		LU632_RS13895	0.51	-1.7
2,663,582	-		LU632_RS13895	0.51	-0.7
2,663,582	-		LU632_RS13895	0.51	+1.0
2,663,641	+		LU632_RS13895	0.60	-1.4