Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS13630

Experiment: plant=Melon; plant sample=MP2; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP2; plant location=NA
2,602,035	+		LU632_RS13620	0.33	+0.8
2,602,067	+		LU632_RS13620	0.46	+1.2
2,602,182	-				-2.6
2,602,226	-				+1.1
2,602,234	-				+1.7
2,602,234	-				+3.5
2,602,269	-				+0.1
2,602,329	-				-0.9
2,602,340	+				-0.2
2,602,341	-				+0.0
2,602,358	+				-0.5
2,602,499	+				-1.2
2,602,536	-				+1.7
2,602,618	-		LU632_RS13625	0.12	+0.2
2,602,684	-		LU632_RS13625	0.38	+0.0
2,602,794	-		LU632_RS13625	0.80	-0.1
2,602,823	+				-0.2
2,602,823	+				-0.0
2,602,833	+				-2.0
2,602,833	+				-0.1
2,602,906	-				+1.4
2,603,036	+		LU632_RS13630	0.26	-0.5
2,603,087	+		LU632_RS13630	0.39	-0.1
2,603,153	+		LU632_RS13630	0.57	-0.9
2,603,169	-		LU632_RS13630	0.61	-1.5
2,603,266	+		LU632_RS13630	0.87	+0.1
2,603,286	+				+0.7
2,603,286	+				+0.3
2,603,287	-				-0.0
2,603,287	-				+0.4
2,603,287	-				+1.3
2,603,329	-				+0.1
2,603,414	+				+1.0
2,603,430	+				-0.4
2,603,448	+				-2.6
2,603,496	-		LU632_RS13635	0.29	+1.8
2,603,526	-		LU632_RS13635	0.49	-0.7
2,603,528	+		LU632_RS13635	0.50	-0.1