Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS12635

Experiment: plant=Melon; plant sample=MP2; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP2; plant location=NA
2,405,932	+	hrpA	LU632_RS12630	0.85	+2.1
2,406,132	+				+0.1
2,406,132	+				-0.5
2,406,215	+				-0.7
2,406,278	+				+0.1
2,406,300	+				+1.1
2,406,301	-				-1.1
2,406,354	+				-0.0
2,406,354	+				-1.1
2,406,366	+				+2.4
2,406,494	+				+1.1
2,406,575	-				+0.3
2,406,611	+				-1.2
2,406,649	-				-0.7
2,406,714	+				+0.4
2,406,714	+				+0.8
2,406,714	+				-1.5
2,406,715	-				+0.1
2,406,750	-				-1.0
2,407,025	-		LU632_RS12635	0.48	+0.4
2,407,146	+		LU632_RS12635	0.68	-1.7
2,407,201	+		LU632_RS12635	0.77	+2.2
2,407,326	+				+0.1
2,407,505	+				+1.5
2,407,530	-				-0.2
2,408,254	+		LU632_RS12645	0.53	-0.1