Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS12215

Experiment: plant=Melon; plant sample=MP2; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP2; plant location=NA
2,317,918	-	zntB	LU632_RS12210	0.39	+0.1
2,317,918	-	zntB	LU632_RS12210	0.39	-0.5
2,317,951	+	zntB	LU632_RS12210	0.42	+0.2
2,318,011	-	zntB	LU632_RS12210	0.48	-0.3
2,318,013	+	zntB	LU632_RS12210	0.49	-1.4
2,318,014	-	zntB	LU632_RS12210	0.49	+0.3
2,318,016	+	zntB	LU632_RS12210	0.49	-0.2
2,318,024	-	zntB	LU632_RS12210	0.50	+0.5
2,318,163	+	zntB	LU632_RS12210	0.64	+0.5
2,318,187	+	zntB	LU632_RS12210	0.66	+0.2
2,318,192	-	zntB	LU632_RS12210	0.67	-0.2
2,318,197	+	zntB	LU632_RS12210	0.67	+0.7
2,318,259	+	zntB	LU632_RS12210	0.74	-0.6
2,318,260	-	zntB	LU632_RS12210	0.74	-1.4
2,318,260	-	zntB	LU632_RS12210	0.74	-1.9
2,318,260	-	zntB	LU632_RS12210	0.74	-1.7
2,318,347	+	zntB	LU632_RS12210	0.83	-1.7
2,318,376	+	zntB	LU632_RS12210	0.86	-2.5
2,318,389	+	zntB	LU632_RS12210	0.87	+0.9
2,318,389	+	zntB	LU632_RS12210	0.87	-0.9
2,318,416	-	zntB	LU632_RS12210	0.90	-0.2
2,318,451	+				-0.4
2,318,473	-				-0.1
2,318,529	-				+0.1
2,318,556	+				-0.5
2,318,581	-				+0.5
2,318,581	-				+0.1
2,318,596	-				+0.5
2,318,672	-				-0.9
2,318,683	+				+2.0
2,318,697	-				+1.3
2,318,701	+				-0.6
2,318,824	-				+0.2
2,318,853	-				+0.7
2,318,853	-				-0.2
2,318,874	+				+1.1
2,318,875	-				-0.9
2,318,995	+		LU632_RS12215	0.45	-1.9
2,319,033	+		LU632_RS12215	0.56	+1.0
2,319,040	-		LU632_RS12215	0.58	+3.8
2,319,040	-		LU632_RS12215	0.58	-1.3
2,319,044	-		LU632_RS12215	0.59	-0.7
2,319,047	+		LU632_RS12215	0.60	+0.9
2,319,047	+		LU632_RS12215	0.60	-0.5
2,319,047	+		LU632_RS12215	0.60	+1.1
2,319,047	+		LU632_RS12215	0.60	+0.9
2,319,047	+		LU632_RS12215	0.60	+1.2