Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS09730

Experiment: plant=Melon; plant sample=MP2; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP2; plant location=NA
1,845,722	-				-1.4
1,845,722	-				+0.9
1,845,775	+				+0.8
1,845,788	+				-0.4
1,845,809	+				-0.7
1,845,851	+				-0.3
1,845,929	+	trxB	LU632_RS09730	0.14	+0.3
1,845,974	+	trxB	LU632_RS09730	0.18	-0.7
1,845,974	+	trxB	LU632_RS09730	0.18	-1.3
1,845,975	-	trxB	LU632_RS09730	0.19	-1.2
1,845,976	+	trxB	LU632_RS09730	0.19	+0.3
1,845,977	-	trxB	LU632_RS09730	0.19	+1.3
1,846,058	+	trxB	LU632_RS09730	0.27	-1.7
1,846,058	+	trxB	LU632_RS09730	0.27	-0.3
1,846,077	-	trxB	LU632_RS09730	0.29	+0.3
1,846,454	-	trxB	LU632_RS09730	0.68	-0.3
1,846,693	+				-1.5
1,846,696	-				+1.3
1,846,696	-				-1.8
1,846,900	+		LU632_RS09735	0.14	+2.3
1,846,954	+		LU632_RS09735	0.31	-0.1
1,846,955	-		LU632_RS09735	0.31	-1.3
1,846,986	+		LU632_RS09735	0.41	-0.6
1,846,986	+		LU632_RS09735	0.41	-2.3
1,846,999	-		LU632_RS09735	0.45	-3.1
1,847,006	+		LU632_RS09735	0.47	+0.3
1,847,054	-		LU632_RS09735	0.62	-1.3
1,847,085	-		LU632_RS09735	0.72	+0.7
1,847,087	+		LU632_RS09735	0.72	-1.4
1,847,087	+		LU632_RS09735	0.72	-0.7
1,847,088	-		LU632_RS09735	0.73	+3.3
1,847,090	-		LU632_RS09735	0.73	+0.8
1,847,119	+		LU632_RS09735	0.82	-0.3
1,847,122	-		LU632_RS09735	0.83	-2.4
1,847,303	+				-1.5
1,847,304	-				-0.5
1,847,463	-	lrp	LU632_RS09740	0.35	+0.3
1,847,475	-	lrp	LU632_RS09740	0.37	-0.1
1,847,497	-	lrp	LU632_RS09740	0.41	-0.0
1,847,519	-	lrp	LU632_RS09740	0.46	-0.1
1,847,519	-	lrp	LU632_RS09740	0.46	-2.5
1,847,699	-	lrp	LU632_RS09740	0.82	-0.3
1,847,726	+	lrp	LU632_RS09740	0.88	-0.2
1,847,727	-	lrp	LU632_RS09740	0.88	-0.4
1,847,727	-	lrp	LU632_RS09740	0.88	-0.2
1,847,730	+	lrp	LU632_RS09740	0.88	-0.1
1,847,730	+	lrp	LU632_RS09740	0.88	-1.1