Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS09650

Experiment: plant=Melon; plant sample=MP2; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP2; plant location=NA
1,828,079	-				-1.9
1,828,079	-				+0.7
1,828,127	+				-2.9
1,828,276	+				-1.5
1,828,279	+				-1.1
1,828,282	-				-0.3
1,828,512	-				-0.5
1,828,550	+				+0.0
1,828,551	-				-0.6
1,828,551	-				-0.2
1,828,728	+				-0.5
1,828,729	-				-0.1
1,828,755	+				-1.5
1,828,755	+				-0.2
1,828,783	-				+2.3
1,828,793	-				+0.1
1,828,873	+				+1.2
1,828,874	-				+0.9
1,828,915	+		LU632_RS09650	0.21	-1.5
1,828,915	+		LU632_RS09650	0.21	-0.0
1,829,091	-		LU632_RS09650	0.71	+0.8
1,829,091	-		LU632_RS09650	0.71	+4.6
1,829,227	+				+0.2
1,829,312	-				+0.5
1,829,317	+				-1.5
1,829,317	+				-0.4
1,829,318	-				-2.1
1,829,318	-				-3.1
1,829,343	-				-1.1
1,829,372	-				-1.6
1,829,388	-				+1.6
1,829,430	+				+0.4
1,829,430	+				+0.8
1,829,430	+				-2.2
1,829,431	-				-0.1
1,829,473	+				-0.2
1,829,474	-				-0.7
1,829,670	+				-0.4
1,829,675	+				+0.6
1,829,784	+				-0.5
1,829,785	-				-0.2
1,829,785	-				+2.7
1,829,786	+				+0.6
1,829,786	+				-0.3
1,829,787	-				-0.7
1,829,787	-				+0.6
1,829,828	+				+2.5
1,829,829	-				+0.6
1,829,829	-				-0.5
1,829,916	-				-0.4
1,829,948	-				+1.1
1,829,955	+				+0.2
1,829,955	+				-1.1
1,829,956	-				-0.4
1,830,020	-				-0.9