Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS09485

Experiment: plant=Melon; plant sample=MP2; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP2; plant location=NA
1,795,447	-		LU632_RS09480	0.33	-2.2
1,795,450	+		LU632_RS09480	0.33	+1.5
1,795,556	-		LU632_RS09480	0.42	-0.3
1,795,645	+		LU632_RS09480	0.50	+0.3
1,795,706	+		LU632_RS09480	0.56	-2.1
1,795,707	-		LU632_RS09480	0.56	-1.1
1,795,707	-		LU632_RS09480	0.56	+0.6
1,795,707	-		LU632_RS09480	0.56	-0.2
1,795,707	-		LU632_RS09480	0.56	-0.6
1,795,773	+		LU632_RS09480	0.62	+1.1
1,795,773	+		LU632_RS09480	0.62	+0.2
1,795,781	-		LU632_RS09480	0.63	+3.2
1,795,854	+		LU632_RS09480	0.69	-0.5
1,795,855	-		LU632_RS09480	0.69	-1.2
1,795,855	-		LU632_RS09480	0.69	-1.3
1,795,893	+		LU632_RS09480	0.73	-0.6
1,795,893	+		LU632_RS09480	0.73	+1.0
1,795,928	+		LU632_RS09480	0.76	-0.1
1,795,928	+		LU632_RS09480	0.76	+0.3
1,795,929	-		LU632_RS09480	0.76	+1.3
1,796,010	+		LU632_RS09480	0.83	+0.1
1,796,010	+		LU632_RS09480	0.83	+1.1
1,796,102	-				+0.3
1,796,104	+				-1.1
1,796,104	+				-0.9
1,796,105	-				-0.3
1,796,172	+				-2.1
1,796,205	-				-0.2
1,796,205	-				-1.7
1,796,245	+				-1.3
1,796,253	-				+2.0
1,796,304	-				+0.2
1,796,313	+				+0.7
1,796,313	+				+1.3
1,796,313	+				+0.5
1,796,314	-				-1.4
1,796,314	-				-0.7
1,796,314	-				-1.1
1,796,314	-				+0.4
1,796,347	-				+0.3
1,796,479	-		LU632_RS09485	0.15	-0.5
1,796,532	+		LU632_RS09485	0.20	+0.4
1,796,564	+		LU632_RS09485	0.23	-0.8
1,796,779	-		LU632_RS09485	0.42	-0.2
1,796,779	-		LU632_RS09485	0.42	-0.1
1,796,794	+		LU632_RS09485	0.43	-1.3
1,796,794	+		LU632_RS09485	0.43	+0.8
1,796,842	-		LU632_RS09485	0.48	-0.7
1,796,864	+		LU632_RS09485	0.50	+2.4
1,796,958	-		LU632_RS09485	0.58	+0.6
1,796,958	-		LU632_RS09485	0.58	+0.8
1,797,046	+		LU632_RS09485	0.66	+1.4
1,797,103	-		LU632_RS09485	0.71	+0.8
1,797,175	-		LU632_RS09485	0.78	+0.0
1,797,200	+		LU632_RS09485	0.80	+0.6
1,797,230	+		LU632_RS09485	0.83	+2.7
1,797,250	-		LU632_RS09485	0.84	+0.3
1,797,310	+		LU632_RS09485	0.90	+0.7
1,797,310	+		LU632_RS09485	0.90	-0.9
1,797,310	+		LU632_RS09485	0.90	-0.7
1,797,310	+		LU632_RS09485	0.90	-1.5
1,797,311	-		LU632_RS09485	0.90	+0.1
1,797,311	-		LU632_RS09485	0.90	-0.6
1,797,311	-		LU632_RS09485	0.90	-0.2
1,797,495	-				+2.8
1,797,515	+				-1.1
1,797,515	+				+2.6
1,797,565	-				-2.5
1,797,565	-				-1.7
1,797,594	+		LU632_RS09490	0.11	+1.8
1,797,594	+		LU632_RS09490	0.11	-0.1
1,797,594	+		LU632_RS09490	0.11	-0.5
1,797,595	-		LU632_RS09490	0.11	-0.3
1,797,595	-		LU632_RS09490	0.11	+1.6
1,797,623	+		LU632_RS09490	0.13	+0.8
1,797,677	+		LU632_RS09490	0.16	+0.0
1,797,678	-		LU632_RS09490	0.16	-3.1
1,797,833	+		LU632_RS09490	0.26	-2.1
1,797,915	+		LU632_RS09490	0.32	-3.9
1,797,915	+		LU632_RS09490	0.32	-1.6
1,797,915	+		LU632_RS09490	0.32	+1.3
1,797,915	+		LU632_RS09490	0.32	-0.3
1,797,916	-		LU632_RS09490	0.32	-1.5
1,797,974	+		LU632_RS09490	0.35	+0.3
1,797,978	+		LU632_RS09490	0.36	+0.1
1,798,041	+		LU632_RS09490	0.40	+0.1
1,798,041	+		LU632_RS09490	0.40	+0.3
1,798,136	+		LU632_RS09490	0.46	-1.9
1,798,182	+		LU632_RS09490	0.49	-2.4
1,798,182	+		LU632_RS09490	0.49	+0.2
1,798,194	+		LU632_RS09490	0.49	+0.3
1,798,221	+		LU632_RS09490	0.51	+0.9
1,798,394	+		LU632_RS09490	0.62	-0.9