Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS09420

Experiment: plant=Melon; plant sample=MP2; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP2; plant location=NA
1,783,228	+		LU632_RS09415	0.52	+0.1
1,783,322	+		LU632_RS09415	0.60	-0.8
1,783,409	-		LU632_RS09415	0.68	-0.3
1,783,409	-		LU632_RS09415	0.68	+0.2
1,783,443	+		LU632_RS09415	0.70	+1.2
1,783,444	-		LU632_RS09415	0.71	+0.1
1,783,446	+		LU632_RS09415	0.71	+1.3
1,783,447	-		LU632_RS09415	0.71	+0.8
1,783,507	+		LU632_RS09415	0.76	-0.0
1,783,507	+		LU632_RS09415	0.76	+2.3
1,783,508	-		LU632_RS09415	0.76	-0.0
1,783,696	-				-1.2
1,783,696	-				-0.5
1,783,714	+				+3.0
1,783,714	+				-0.1
1,783,715	-				-0.3
1,783,785	+				-0.1
1,783,829	-				-0.0
1,783,834	-				+1.2
1,784,045	+		LU632_RS09420	0.52	-2.4
1,784,099	+		LU632_RS09420	0.82	-1.1
1,784,114	+				+0.3
1,784,114	+				-0.3
1,784,114	+				+0.4
1,784,117	-				-1.3
1,784,153	-				+0.3
1,784,164	-				+0.3
1,784,230	+				-2.6
1,784,230	+				+0.1
1,784,230	+				-1.3
1,784,231	-				+0.1
1,784,245	-				+0.0
1,784,253	+				-0.7
1,784,253	+				+0.3
1,784,254	-				+0.0
1,784,461	+				-1.3
1,784,462	-				+0.3
1,784,504	+				+0.4
1,784,595	+				+1.1
1,784,595	+				+0.6
1,784,596	-				-2.0
1,784,640	-				+0.5
1,784,721	-				-0.3
1,784,721	-				+1.3
1,784,721	-				-2.2
1,784,721	-				-1.5
1,784,763	+				+0.3
1,784,763	+				-2.2
1,784,785	-				+0.8
1,784,801	+				-0.9
1,784,801	+				-0.4
1,784,980	+		LU632_RS09425	0.26	-1.0
1,784,981	-		LU632_RS09425	0.26	+0.3
1,784,981	-		LU632_RS09425	0.26	-0.6
1,785,054	+		LU632_RS09425	0.40	+1.1
1,785,054	+		LU632_RS09425	0.40	+0.5
1,785,055	-		LU632_RS09425	0.40	+0.4
1,785,110	+		LU632_RS09425	0.51	+0.1
1,785,116	+		LU632_RS09425	0.52	-0.4
1,785,117	-		LU632_RS09425	0.52	-0.7