Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS09045

Experiment: plant=Melon; plant sample=MP2; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP2; plant location=NA
1,701,480	+				+1.5
1,701,480	+				+1.2
1,701,481	-				+0.3
1,701,510	+				+0.4
1,701,624	-				+0.5
1,702,141	-		LU632_RS09040	0.41	-0.4
1,702,146	+		LU632_RS09040	0.42	-1.2
1,702,203	+		LU632_RS09040	0.60	+0.7
1,702,216	-		LU632_RS09040	0.64	-0.3
1,702,280	+		LU632_RS09040	0.84	+2.5
1,702,281	-		LU632_RS09040	0.85	-1.0
1,702,293	-		LU632_RS09040	0.88	-1.0
1,702,293	-		LU632_RS09040	0.88	-0.7
1,702,342	+				+1.4
1,702,346	+				+0.8
1,702,349	-				+1.1
1,702,349	-				+0.4
1,702,429	+		LU632_RS09045	0.40	+0.3
1,702,507	-		LU632_RS09045	0.80	+1.8
1,702,583	-				+2.0
1,702,637	+				+0.2
1,702,658	-				+0.9
1,702,818	-				+0.3