Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS08500

Experiment: plant=Melon; plant sample=MP2; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP2; plant location=NA
1,593,786	+		LU632_RS08490	0.86	+3.3
1,593,787	-		LU632_RS08490	0.87	+0.6
1,593,910	+				+0.8
1,593,913	+				-0.1
1,593,913	+				-1.9
1,593,945	+				-0.8
1,593,945	+				+0.1
1,593,950	-				-0.4
1,593,955	+				-0.3
1,593,956	-				-0.7
1,593,979	-				+0.9
1,594,011	+				-0.9
1,594,012	-				+0.2
1,594,047	+				+0.3
1,594,066	+				+0.4
1,594,070	-				+0.5
1,594,232	+				-0.3
1,594,232	+				-0.0
1,594,233	-				+0.8
1,594,280	+				-1.0
1,594,280	+				-1.8
1,594,321	-				+0.3
1,594,334	+				-0.6
1,594,334	+				+0.4
1,594,334	+				+0.6
1,594,335	-				+2.9
1,594,335	-				-1.7
1,594,449	-		LU632_RS08495	0.29	-0.3
1,594,449	-		LU632_RS08495	0.29	-1.0
1,594,599	+		LU632_RS08495	0.59	+5.0
1,594,599	+		LU632_RS08495	0.59	-0.3
1,594,600	-		LU632_RS08495	0.59	+1.0
1,594,613	+		LU632_RS08495	0.62	-1.4
1,594,614	-		LU632_RS08495	0.62	+1.9
1,594,614	-		LU632_RS08495	0.62	+1.0
1,594,614	-		LU632_RS08495	0.62	-1.0
1,594,620	-		LU632_RS08495	0.63	-0.3
1,594,697	+		LU632_RS08495	0.79	+0.3
1,594,697	+		LU632_RS08495	0.79	-0.3
1,594,698	-		LU632_RS08495	0.79	-0.1
1,594,772	-				-0.3
1,594,986	+		LU632_RS08500	0.36	-0.7
1,595,046	-		LU632_RS08500	0.46	-0.8
1,595,427	+				+0.0
1,595,427	+				+0.1
1,595,431	+				+0.0
1,595,431	+				-1.3
1,595,462	-				+0.3
1,595,469	+				+1.3
1,595,469	+				-0.9
1,595,470	-				+1.3
1,595,470	-				-0.3
1,595,553	+				-0.5
1,595,554	-				-0.2
1,595,623	-				+2.0
1,595,677	+				-0.7