Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS07345

Experiment: plant=Melon; plant sample=MP2; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP2; plant location=NA
1,386,270	-				+1.8
1,386,270	-				+0.6
1,386,292	+				+0.8
1,386,292	+				-0.7
1,386,292	+				+1.0
1,386,292	+				-1.0
1,386,292	-				-0.9
1,386,293	-				-2.4
1,386,293	-				-2.7
1,386,293	-				+2.8
1,386,293	-				-0.9
1,386,294	+				+0.5
1,386,294	+				-0.3
1,386,294	+				+0.0
1,386,294	+				-1.2
1,386,294	+				-0.7
1,386,295	-				-1.3
1,386,295	-				-0.5
1,386,295	-				-0.1
1,386,295	-				-1.7
1,386,338	-				+1.6
1,386,429	-				-0.7
1,386,454	-		LU632_RS07345	0.20	+1.7
1,386,485	+		LU632_RS07345	0.33	+1.7
1,386,485	+		LU632_RS07345	0.33	-0.4
1,386,501	+		LU632_RS07345	0.40	+1.2
1,386,622	-				+0.7
1,386,636	+				-0.5
1,386,636	+				+3.1
1,386,759	+		LU632_RS07350	0.12	+0.9
1,386,759	+		LU632_RS07350	0.12	-0.4
1,386,823	-		LU632_RS07350	0.23	-4.5
1,386,823	-		LU632_RS07350	0.23	-0.9
1,386,827	+		LU632_RS07350	0.23	+0.0
1,386,828	-		LU632_RS07350	0.23	-2.1
1,386,828	-		LU632_RS07350	0.23	-0.8
1,386,845	+		LU632_RS07350	0.26	+1.0
1,386,914	+		LU632_RS07350	0.37	-0.2
1,386,915	-		LU632_RS07350	0.37	+1.1
1,386,974	+		LU632_RS07350	0.47	-0.7
1,386,974	+		LU632_RS07350	0.47	+1.3
1,386,975	-		LU632_RS07350	0.47	+2.2
1,386,975	-		LU632_RS07350	0.47	-0.4
1,386,975	-		LU632_RS07350	0.47	-0.8
1,386,975	-		LU632_RS07350	0.47	+1.5
1,386,975	-		LU632_RS07350	0.47	-0.2
1,386,992	+		LU632_RS07350	0.50	+2.7
1,387,077	-		LU632_RS07350	0.63	+0.2
1,387,191	+		LU632_RS07350	0.81	-0.0
1,387,191	+		LU632_RS07350	0.81	-1.0
1,387,191	+		LU632_RS07350	0.81	-0.4
1,387,192	-		LU632_RS07350	0.81	+2.2
1,387,192	-		LU632_RS07350	0.81	+0.3
1,387,294	-				-0.2
1,387,294	-				+0.1
1,387,294	-				+0.1
1,387,294	-				-0.7
1,387,295	+				-0.7
1,387,296	-				-2.2
1,387,296	-				-0.7
1,387,356	+				+0.3
1,387,357	-				-0.2
1,387,357	-				-1.3
1,387,361	+				+0.0
1,387,362	-				+3.4
1,387,365	+				+2.3
1,387,366	-				+0.9
1,387,372	+				-1.6
1,387,372	+				-0.1
1,387,372	+				-0.3
1,387,373	-				+0.5
1,387,373	-				+0.6