Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS06905

Experiment: plant=Melon; plant sample=MP2; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP2; plant location=NA
1,324,136	-		LU632_RS06900	0.49	+2.5
1,324,136	-		LU632_RS06900	0.49	-0.8
1,324,244	+		LU632_RS06900	0.57	-0.8
1,324,287	-		LU632_RS06900	0.61	-0.2
1,324,354	-		LU632_RS06900	0.66	-0.6
1,324,370	+		LU632_RS06900	0.67	+0.6
1,324,371	-		LU632_RS06900	0.67	-0.2
1,324,380	+		LU632_RS06900	0.68	+0.4
1,324,380	+		LU632_RS06900	0.68	-1.1
1,324,381	-		LU632_RS06900	0.68	+0.7
1,324,381	-		LU632_RS06900	0.68	-2.7
1,324,397	+		LU632_RS06900	0.69	+1.4
1,324,397	+		LU632_RS06900	0.69	+0.9
1,324,397	+		LU632_RS06900	0.69	-1.2
1,324,398	-		LU632_RS06900	0.69	+0.0
1,324,411	+		LU632_RS06900	0.70	-0.1
1,324,411	+		LU632_RS06900	0.70	+0.5
1,324,412	-		LU632_RS06900	0.70	-1.6
1,324,429	-		LU632_RS06900	0.71	+0.9
1,324,505	+		LU632_RS06900	0.77	+1.3
1,324,505	+		LU632_RS06900	0.77	-0.3
1,324,505	+		LU632_RS06900	0.77	+2.2
1,324,505	+		LU632_RS06900	0.77	-3.7
1,324,506	-		LU632_RS06900	0.77	+0.3
1,324,506	-		LU632_RS06900	0.77	+0.6
1,324,506	-		LU632_RS06900	0.77	+0.1
1,324,506	-		LU632_RS06900	0.77	+2.1
1,324,508	-		LU632_RS06900	0.78	-0.1
1,324,596	-		LU632_RS06900	0.84	-1.8
1,324,676	-				-1.6
1,324,721	-				+0.9
1,324,747	+				+2.3
1,324,748	-				+1.1
1,324,776	+				-2.3
1,324,978	+				+0.4
1,324,978	+				+2.0
1,324,979	-				-1.8
1,324,979	-				+0.3
1,324,979	-				+2.1
1,325,089	+		LU632_RS06905	0.84	-1.4
1,325,106	+				-2.4
1,325,106	+				-0.6
1,325,107	-				+2.2
1,325,107	-				-1.0
1,325,107	-				-1.5
1,325,110	+				+0.8
1,325,110	+				+1.4
1,325,111	-				-1.6
1,325,111	-				-1.4
1,325,111	-				-2.0
1,325,111	-				-1.7
1,325,112	+				-0.6
1,325,112	+				-1.4
1,325,113	-				+1.2
1,325,113	-				-0.4
1,325,167	-				+0.1
1,325,298	+		LU632_RS06910	0.31	+0.9
1,325,318	+		LU632_RS06910	0.35	+0.9
1,325,319	-		LU632_RS06910	0.35	-1.3
1,325,514	+		LU632_RS06910	0.77	+1.5
1,325,514	+		LU632_RS06910	0.77	-0.4
1,325,515	-		LU632_RS06910	0.77	-1.3
1,325,515	-		LU632_RS06910	0.77	+4.0
1,325,515	-		LU632_RS06910	0.77	-1.5
1,325,519	+		LU632_RS06910	0.78	-0.2
1,325,535	+		LU632_RS06910	0.81	-2.2
1,325,535	+		LU632_RS06910	0.81	-2.1
1,325,536	-		LU632_RS06910	0.81	-0.2
1,325,568	-		LU632_RS06910	0.88	+0.0
1,325,600	+				-0.6
1,325,601	-				-1.0
1,325,601	-				-0.2
1,325,601	-				+0.9
1,325,601	-				-0.6
1,325,601	-				+0.2
1,325,604	+				-0.6
1,325,605	-				+0.1
1,325,658	+		LU632_RS06915	0.16	+0.7
1,325,709	-		LU632_RS06915	0.39	+0.5
1,325,709	-		LU632_RS06915	0.39	+0.1
1,325,719	-		LU632_RS06915	0.44	+0.3
1,325,740	+		LU632_RS06915	0.53	-0.9
1,325,741	-		LU632_RS06915	0.53	-0.6
1,325,741	-		LU632_RS06915	0.53	+0.4
1,326,051	+				+2.6
1,326,051	+				-0.2
1,326,051	+				+0.4
1,326,052	-				+1.1
1,326,052	-				-0.1
1,326,052	-				-1.6
1,326,052	-				-1.6
1,326,052	-				-0.3
1,326,052	-				+1.8