Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS05855

Experiment: plant=Melon; plant sample=MP2; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP2; plant location=NA
1,110,264	+				-0.5
1,110,265	-				+0.2
1,110,973	-				+0.1
1,111,014	+				+0.6
1,111,041	+				-0.5
1,111,150	+				-0.6
1,111,201	+				+1.3
1,111,230	+				-3.0
1,111,231	-				-1.1
1,111,234	+				+0.3
1,111,278	+				-2.3
1,111,320	+				+0.7
1,111,320	+				-1.8
1,111,320	+				-2.5
1,111,320	+				-1.9
1,111,322	+				-2.7
1,111,322	+				-0.2
1,111,322	+				+0.4
1,111,322	+				-2.2
1,111,323	-				+1.0
1,111,323	-				-2.3
1,111,519	-	serA	LU632_RS05855	0.22	+0.1
1,111,607	+	serA	LU632_RS05855	0.29	-3.1
1,111,616	+	serA	LU632_RS05855	0.30	+0.8
1,111,617	-	serA	LU632_RS05855	0.30	+0.5
1,111,617	-	serA	LU632_RS05855	0.30	-1.6
1,111,641	+	serA	LU632_RS05855	0.32	-2.9
1,111,684	+	serA	LU632_RS05855	0.35	-1.4
1,111,685	-	serA	LU632_RS05855	0.36	-2.2
1,111,685	-	serA	LU632_RS05855	0.36	-0.6
1,111,713	+	serA	LU632_RS05855	0.38	-0.5
1,111,713	+	serA	LU632_RS05855	0.38	-0.4
1,111,714	-	serA	LU632_RS05855	0.38	-1.9
1,111,783	+	serA	LU632_RS05855	0.43	-2.0
1,111,783	+	serA	LU632_RS05855	0.43	-2.0
1,111,784	-	serA	LU632_RS05855	0.44	-0.7
1,111,784	-	serA	LU632_RS05855	0.44	-2.0
1,111,827	+	serA	LU632_RS05855	0.47	-0.8
1,111,902	+	serA	LU632_RS05855	0.53	-2.1
1,111,903	-	serA	LU632_RS05855	0.53	-3.4
1,112,275	-	serA	LU632_RS05855	0.83	-1.2
1,112,310	+	serA	LU632_RS05855	0.86	-2.0
1,112,311	-	serA	LU632_RS05855	0.86	-1.5
1,112,311	-	serA	LU632_RS05855	0.86	-0.1
1,112,316	+	serA	LU632_RS05855	0.87	-1.9
1,112,337	+	serA	LU632_RS05855	0.88	-1.7
1,112,338	-	serA	LU632_RS05855	0.88	-1.8
1,112,353	+	serA	LU632_RS05855	0.90	-3.0
1,112,380	+				-1.6
1,112,487	-				-0.6
1,112,500	-				+1.7
1,112,511	+				+0.2
1,112,546	-				-0.3
1,112,548	+				+1.5
1,112,548	+				+0.1
1,112,548	+				-0.6
1,112,548	+				+0.3
1,112,548	+				-1.1
1,112,549	-				-0.6
1,112,549	-				+0.5
1,112,549	-				-0.1
1,112,549	-				+0.4
1,112,550	+				-0.4
1,112,550	+				+0.4
1,112,550	+				+0.1
1,112,550	+				+1.1
1,112,550	+				+2.8
1,112,550	+				+0.4
1,112,551	-				-0.3
1,112,551	-				-1.2
1,112,551	-				+1.0
1,112,591	+				+2.5
1,112,591	+				-0.2
1,112,595	+				+0.7