Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS05545

Experiment: plant=Melon; plant sample=MP2; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP2; plant location=NA
1,074,952	+				+0.2
1,074,954	+				+3.4
1,074,978	+				+0.7
1,074,978	+				-0.3
1,075,080	+				-0.2
1,075,106	+				+1.1
1,075,195	+				-0.2
1,075,220	-				+1.1
1,075,281	+				+0.2
1,075,534	+	mscS	LU632_RS05550	0.37	+0.2
1,075,608	-	mscS	LU632_RS05550	0.46	+0.4
1,075,764	-	mscS	LU632_RS05550	0.63	+1.6
1,075,811	-	mscS	LU632_RS05550	0.69	-0.3
1,075,844	-	mscS	LU632_RS05550	0.72	+0.1