Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS05535

Experiment: plant=Melon; plant sample=MP2; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP2; plant location=NA
1,070,611	+		LU632_RS05525	0.52	-0.6
1,070,612	-		LU632_RS05525	0.52	+0.2
1,070,659	-		LU632_RS05525	0.61	+0.3
1,070,667	+		LU632_RS05525	0.62	-0.5
1,070,667	+		LU632_RS05525	0.62	-0.9
1,070,722	-		LU632_RS05525	0.72	-0.3
1,070,731	+		LU632_RS05525	0.74	+0.3
1,070,731	+		LU632_RS05525	0.74	-2.9
1,070,731	+		LU632_RS05525	0.74	+0.3
1,070,731	+		LU632_RS05525	0.74	-1.3
1,070,731	+		LU632_RS05525	0.74	+0.6
1,070,731	+		LU632_RS05525	0.74	+1.7
1,070,732	-		LU632_RS05525	0.74	+0.7
1,070,732	-		LU632_RS05525	0.74	-0.2
1,070,847	+				-1.1
1,070,890	+		LU632_RS05530	0.15	+0.0
1,071,007	+		LU632_RS05530	0.82	-0.0
1,071,007	-		LU632_RS05530	0.82	+0.2
1,071,008	+		LU632_RS05530	0.83	+0.3
1,071,008	-		LU632_RS05530	0.83	+0.9
1,071,011	-		LU632_RS05530	0.84	-0.0
1,071,030	+				-0.3
1,071,054	+				+0.3
1,071,055	-				+4.7
1,071,230	-				-0.9
1,071,235	+				+0.2
1,071,236	-				-0.3
1,071,240	-				+0.1
1,071,270	+				-2.4
1,071,270	+				-0.8
1,071,277	+				+1.3
1,071,348	+				-0.0
1,071,410	+				-0.0
1,071,414	+				+0.4
1,071,414	+				+0.4
1,071,497	+				-0.4
1,071,498	-				-1.4
1,071,562	-				+1.6
1,071,645	+	epd	LU632_RS05535	0.14	+0.4
1,071,645	+	epd	LU632_RS05535	0.14	+1.4
1,071,645	+	epd	LU632_RS05535	0.14	+0.9
1,071,646	-	epd	LU632_RS05535	0.14	+4.0
1,071,646	-	epd	LU632_RS05535	0.14	+1.0
1,071,646	-	epd	LU632_RS05535	0.14	+2.4
1,071,646	-	epd	LU632_RS05535	0.14	-0.6
1,071,646	-	epd	LU632_RS05535	0.14	-2.8
1,071,794	+	epd	LU632_RS05535	0.28	+0.8
1,071,805	-	epd	LU632_RS05535	0.29	+1.8
1,071,881	+	epd	LU632_RS05535	0.37	-0.5
1,071,881	+	epd	LU632_RS05535	0.37	+0.1
1,071,882	-	epd	LU632_RS05535	0.37	+0.4
1,071,903	+	epd	LU632_RS05535	0.39	+1.4
1,071,903	+	epd	LU632_RS05535	0.39	+2.4
1,071,974	+	epd	LU632_RS05535	0.45	-0.0
1,071,975	-	epd	LU632_RS05535	0.46	-0.5
1,072,118	+	epd	LU632_RS05535	0.59	+2.0
1,072,119	-	epd	LU632_RS05535	0.59	+0.4
1,072,122	-	epd	LU632_RS05535	0.60	+1.0
1,072,122	-	epd	LU632_RS05535	0.60	+0.8
1,072,201	+	epd	LU632_RS05535	0.67	+0.4
1,072,202	-	epd	LU632_RS05535	0.67	+0.8
1,072,321	+	epd	LU632_RS05535	0.79	+0.4
1,072,321	+	epd	LU632_RS05535	0.79	-1.0