Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS05370

Experiment: plant=Melon; plant sample=MP2; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP2; plant location=NA
1,035,063	+				+0.4
1,035,072	+				+4.4
1,035,135	+		LU632_RS05360	0.36	+0.7
1,035,136	-		LU632_RS05360	0.37	+0.1
1,035,317	-				-0.2
1,035,346	+				-0.0
1,035,365	-				-0.3
1,035,365	-				+0.8
1,035,365	-				+0.8
1,035,398	+				+1.6
1,035,437	+				-1.0
1,035,707	+				+1.4
1,035,814	-		LU632_RS05370	0.18	-1.2
1,035,861	+		LU632_RS05370	0.25	+1.3
1,035,892	-		LU632_RS05370	0.30	+1.1
1,035,906	-		LU632_RS05370	0.32	-1.3
1,035,918	-		LU632_RS05370	0.34	+0.7
1,035,926	+		LU632_RS05370	0.35	+2.9
1,035,927	-		LU632_RS05370	0.35	+0.9
1,035,936	-		LU632_RS05370	0.37	+0.5
1,035,983	-		LU632_RS05370	0.44	-0.1
1,036,187	-		LU632_RS05370	0.75	-0.5
1,036,505	+				-0.1
1,036,505	+				+0.6
1,036,615	-				+0.8
1,036,645	+				-1.2
1,036,646	-				+2.0
1,036,701	-				-1.1
1,036,720	+				+1.2
1,036,778	+				+0.2