Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS04510

Experiment: plant=Melon; plant sample=MP2; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP2; plant location=NA
884,739	+				-0.9
884,739	+				-0.5
884,751	+				+0.3
884,766	+				-1.8
884,766	+				+0.1
884,766	+				-0.7
884,767	-				-0.9
884,837	+				+2.5
884,838	-				-2.9
884,846	+				-0.4
884,846	+				-0.2
884,846	+				+1.1
884,846	+				+0.7
884,846	+				-0.6
884,846	+				+1.0
884,847	-				+0.4
884,847	-				+0.5
884,847	-				-0.5
884,847	-				+0.5
884,847	-				+1.5
884,847	-				+0.6
884,851	-				-0.2
884,927	-				+0.2
884,927	-				-0.7
884,928	+				+2.1
884,951	-				+0.5
884,980	-				+1.8
884,980	-				+0.6
885,014	+				+0.7
885,015	-				-0.1
885,015	-				+1.1
885,015	-				+0.2
885,017	+				-0.8
885,126	+				-2.3
885,126	+				+1.5
885,126	+				-0.2
885,131	+				-0.1
885,132	-				+0.4
885,253	-		LU632_RS04505	0.26	-0.3
885,279	-		LU632_RS04505	0.32	-0.3
885,304	-		LU632_RS04505	0.38	+1.8
885,310	-		LU632_RS04505	0.39	+1.3
885,310	-		LU632_RS04505	0.39	-1.1
885,586	-				-1.1
887,037	+				+1.0
887,627	+				-1.5