Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS00400

Experiment: plant=Melon; plant sample=MP2; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP2; plant location=NA
83,718	-		LU632_RS00395	0.75	-1.4
83,815	-		LU632_RS00395	0.80	-0.5
83,859	+		LU632_RS00395	0.82	+0.8
83,859	+		LU632_RS00395	0.82	+0.7
83,879	+		LU632_RS00395	0.83	-0.4
83,879	+		LU632_RS00395	0.83	-1.0
83,880	-		LU632_RS00395	0.83	-1.2
83,939	+		LU632_RS00395	0.86	-1.2
83,939	+		LU632_RS00395	0.86	+0.3
83,942	+		LU632_RS00395	0.86	+1.2
83,943	-		LU632_RS00395	0.86	+1.2
83,943	-		LU632_RS00395	0.86	-0.3
83,946	-		LU632_RS00395	0.86	+0.5
83,957	+		LU632_RS00395	0.87	+0.0
84,013	+		LU632_RS00395	0.89	-1.0
84,016	+		LU632_RS00395	0.90	+1.8
84,017	-		LU632_RS00395	0.90	-2.5
84,038	+				-1.3
84,038	+				-1.6
84,039	-				+1.9
84,172	+				-0.2
84,174	-				-1.1
84,256	-				+1.3
84,310	+				+0.6
84,310	+				-2.4
84,310	+				+0.6
84,310	+				-1.7
84,311	-				+0.4
84,311	-				-0.0
84,327	+				-1.9
84,327	+				+0.4
84,327	+				-0.6
84,328	-				-1.7
84,487	+				+0.3
84,494	+				-1.0
84,495	-				+1.1
84,531	-				+1.6
84,556	+				+0.5
84,603	+				-0.3
84,605	+				+1.7
84,680	-				+1.0
84,900	+		LU632_RS00400	0.27	-2.6
85,510	+				+1.8