Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS25450

Experiment: plant=Melon; plant sample=MP1; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP1; plant location=NA
25,188	+		LU632_RS25445	0.50	-2.4
25,361	+		LU632_RS25445	0.59	+0.6
25,362	-		LU632_RS25445	0.59	+0.9
25,362	-		LU632_RS25445	0.59	-1.1
25,362	-		LU632_RS25445	0.59	-0.1
25,373	-		LU632_RS25445	0.60	+1.5
25,480	-		LU632_RS25445	0.65	-0.7
25,558	+		LU632_RS25445	0.69	+0.4
25,604	+		LU632_RS25445	0.72	-1.0
25,605	-		LU632_RS25445	0.72	+0.2
25,605	-		LU632_RS25445	0.72	+1.6
25,623	-		LU632_RS25445	0.73	-0.9
25,697	+		LU632_RS25445	0.76	-1.2
25,697	+		LU632_RS25445	0.76	-0.4
25,697	+		LU632_RS25445	0.76	+0.5
25,697	+		LU632_RS25445	0.76	-1.1
25,698	-		LU632_RS25445	0.77	-0.7
25,698	-		LU632_RS25445	0.77	+0.7
25,726	-		LU632_RS25445	0.78	+0.2
25,802	+		LU632_RS25445	0.82	+0.9
26,087	+				-1.7
26,115	+				-0.4
26,195	+		LU632_RS25450	0.12	+2.0
26,221	+		LU632_RS25450	0.20	+3.2
26,221	+		LU632_RS25450	0.20	-0.5
26,281	-		LU632_RS25450	0.37	-1.1
26,395	+		LU632_RS25450	0.70	-1.3
26,492	-				+0.1
26,535	+				+0.8
26,536	-				+1.3
26,653	+				+0.1
26,656	-				+1.6
26,714	-				-0.2
26,730	-				-0.1
26,796	+				+0.8
26,797	-				-0.6
26,820	+		LU632_RS25455	0.14	+0.6
26,868	+		LU632_RS25455	0.29	-0.3
26,869	-		LU632_RS25455	0.30	+0.2
27,085	+				-0.1
27,312	+				+0.6
27,421	+		LU632_RS25460	0.19	+0.3
27,421	+		LU632_RS25460	0.19	+1.5
27,442	+		LU632_RS25460	0.22	-0.8
27,443	-		LU632_RS25460	0.22	+2.3
27,447	-		LU632_RS25460	0.22	+2.5