Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS24805

Experiment: plant=Melon; plant sample=MP1; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP1; plant location=NA
4,725,077	-				-0.0
4,725,152	-	atpI	LU632_RS24805	0.25	-1.4
4,725,239	-	atpI	LU632_RS24805	0.48	+0.1
4,725,421	-				-0.7
4,725,562	+				-0.6
4,725,563	-				+2.0
4,725,586	-				+1.2
4,725,602	+				+0.5
4,725,628	+				-1.2
4,725,665	+				-0.7
4,725,742	-				+0.5
4,725,893	+				+0.4
4,725,897	-				-1.0
4,726,140	+				+0.2
4,726,144	+				-0.1
4,726,151	-				-0.3
4,726,266	-				-0.8
4,726,310	-	rsmG	LU632_RS24810	0.10	+0.7
4,726,383	+	rsmG	LU632_RS24810	0.22	+4.5
4,726,383	+	rsmG	LU632_RS24810	0.22	-0.5
4,726,389	-	rsmG	LU632_RS24810	0.23	-1.8
4,726,389	-	rsmG	LU632_RS24810	0.23	-2.8
4,726,435	+	rsmG	LU632_RS24810	0.30	-0.5
4,726,435	+	rsmG	LU632_RS24810	0.30	+1.7
4,726,435	+	rsmG	LU632_RS24810	0.30	-0.1
4,726,436	-	rsmG	LU632_RS24810	0.30	-1.2
4,726,436	-	rsmG	LU632_RS24810	0.30	-1.9
4,726,436	-	rsmG	LU632_RS24810	0.30	-0.1
4,726,436	-	rsmG	LU632_RS24810	0.30	-2.5
4,726,436	-	rsmG	LU632_RS24810	0.30	+0.7
4,726,436	-	rsmG	LU632_RS24810	0.30	+2.5