Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS24455

Experiment: plant=Melon; plant sample=MP1; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP1; plant location=NA
4,664,478	+				-0.1
4,664,478	+				-0.9
4,664,636	+	hdfR	LU632_RS24450	0.28	+1.3
4,664,709	+	hdfR	LU632_RS24450	0.37	+0.7
4,664,789	-	hdfR	LU632_RS24450	0.47	+1.1
4,664,940	+	hdfR	LU632_RS24450	0.65	-0.5
4,664,940	+	hdfR	LU632_RS24450	0.65	-0.3
4,664,941	-	hdfR	LU632_RS24450	0.65	+1.3
4,664,941	-	hdfR	LU632_RS24450	0.65	-1.1
4,664,942	+	hdfR	LU632_RS24450	0.65	-0.3
4,664,942	+	hdfR	LU632_RS24450	0.65	-0.7
4,664,943	-	hdfR	LU632_RS24450	0.65	-0.3
4,665,017	-	hdfR	LU632_RS24450	0.74	-0.9
4,665,079	+	hdfR	LU632_RS24450	0.82	-0.3
4,665,113	-	hdfR	LU632_RS24450	0.86	-0.1
4,665,153	+				+0.1
4,665,154	-				+0.7
4,665,249	+				-1.6
4,665,249	+				-1.0
4,665,276	+				+1.7
4,665,312	+				+1.0
4,665,312	+				+1.2
4,665,312	+				-0.5
4,665,313	-				-0.7
4,665,313	-				-1.1
4,665,314	+				-0.3
4,666,156	+				-0.4
4,666,178	+				+0.0
4,666,224	+				-1.8
4,666,224	+				+0.3
4,666,225	-				+0.5
4,666,225	-				-0.7
4,666,226	+				+0.1
4,666,252	-				-1.7