Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS23610

Experiment: plant=Melon; plant sample=MP1; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP1; plant location=NA
4,504,522	+				-0.7
4,504,522	+				-0.3
4,504,560	+				+0.6
4,504,560	+				+1.3
4,504,564	+				+0.4
4,504,564	+				+0.3
4,504,564	+				-0.6
4,504,581	+				-0.3
4,504,582	-				-0.4
4,504,591	+				-1.2
4,504,591	+				-2.1
4,504,591	+				+2.3
4,504,591	+				+0.1
4,504,591	+				-0.2
4,504,591	-				-0.2
4,504,592	-				+0.1
4,504,592	-				-1.3
4,504,593	+				+0.4
4,504,737	-				+0.0
4,504,740	-				+0.4
4,504,740	-				-0.3
4,504,740	-				-0.9
4,504,740	-				-1.4
4,504,741	+				-0.1
4,504,741	+				-1.1
4,504,741	+				+1.8
4,504,741	+				+0.4
4,504,742	-				-1.7
4,504,742	-				-0.6
4,504,745	+				+0.4
4,504,746	-				-2.2
4,504,849	-				-2.0
4,504,849	-				-0.8
4,504,863	-				-0.3
4,504,913	+				+0.3
4,504,992	+				-3.2
4,504,992	+				+0.6
4,505,022	-				+1.5
4,505,022	-				-0.5
4,505,022	-				-0.2
4,505,164	+		LU632_RS23610	0.15	+0.5
4,505,165	-		LU632_RS23610	0.15	-1.1
4,505,497	+		LU632_RS23610	0.49	+0.3
4,505,497	+		LU632_RS23610	0.49	-0.5
4,505,497	+		LU632_RS23610	0.49	+0.1
4,505,497	+		LU632_RS23610	0.49	-1.6
4,505,552	-		LU632_RS23610	0.54	-0.5
4,505,562	-		LU632_RS23610	0.55	+0.5
4,505,562	-		LU632_RS23610	0.55	-0.6
4,505,562	-		LU632_RS23610	0.55	-1.1
4,505,753	-		LU632_RS23610	0.74	-1.1
4,505,756	+		LU632_RS23610	0.75	-1.7
4,505,756	+		LU632_RS23610	0.75	+0.0
4,505,846	+		LU632_RS23610	0.84	-1.7
4,505,846	+		LU632_RS23610	0.84	-0.2
4,505,846	+		LU632_RS23610	0.84	-0.9
4,505,851	-		LU632_RS23610	0.84	+0.9
4,505,876	+		LU632_RS23610	0.87	-1.0
4,505,991	+				+1.4
4,505,992	-				-0.8
4,505,997	+				-0.5
4,506,033	-				+1.0
4,506,056	+				-1.3
4,506,057	-				-1.5
4,506,057	-				+0.3
4,506,090	-				-2.5
4,506,090	-				+1.6
4,506,219	+				+1.5
4,506,271	+				-0.5
4,506,567	-				-0.9
4,506,578	+				-0.9
4,506,579	-				+0.0
4,506,579	-				+0.7
4,506,679	+		LU632_RS23620	0.30	-1.3
4,506,759	-		LU632_RS23620	0.51	+2.7
4,506,759	-		LU632_RS23620	0.51	-2.1
4,506,825	-		LU632_RS23620	0.68	+0.1
4,506,827	+		LU632_RS23620	0.69	+0.6
4,506,828	-		LU632_RS23620	0.69	-0.6
4,506,998	+				+0.1