Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS23365

Experiment: plant=Melon; plant sample=MP1; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP1; plant location=NA
4,451,531	-				+0.4
4,451,591	-				+0.2
4,451,607	+				+0.1
4,451,634	+				-0.5
4,451,634	+				-1.6
4,451,685	+				-0.6
4,451,708	+				-1.4
4,451,715	-				-0.9
4,451,720	+				-1.4
4,451,721	-				-0.9
4,451,749	+				-2.4
4,451,812	+		LU632_RS23360	0.12	-2.8
4,451,817	+		LU632_RS23360	0.13	-0.6
4,451,817	+		LU632_RS23360	0.13	-1.1
4,451,820	-		LU632_RS23360	0.13	-1.7
4,451,820	-		LU632_RS23360	0.13	-1.8
4,451,965	-		LU632_RS23360	0.32	-0.3
4,452,053	+		LU632_RS23360	0.43	-1.2
4,452,268	-		LU632_RS23360	0.71	-0.0
4,452,279	-		LU632_RS23360	0.72	-0.2
4,452,486	+				-1.5
4,452,487	-				+1.4
4,452,487	-				-2.8
4,452,487	-				-0.9
4,452,605	+				+0.4
4,452,605	+				-0.6
4,452,671	-		LU632_RS23365	0.16	+0.1
4,452,690	+		LU632_RS23365	0.18	-1.3
4,452,919	-		LU632_RS23365	0.44	-1.1
4,452,920	+		LU632_RS23365	0.44	+0.7
4,452,920	+		LU632_RS23365	0.44	+0.6
4,452,921	-		LU632_RS23365	0.44	-0.9
4,452,921	-		LU632_RS23365	0.44	+0.2
4,452,955	-		LU632_RS23365	0.48	+1.9
4,453,001	-		LU632_RS23365	0.53	-1.2
4,453,001	-		LU632_RS23365	0.53	+0.1
4,453,201	+		LU632_RS23365	0.75	-1.0
4,453,201	+		LU632_RS23365	0.75	-0.8
4,453,202	-		LU632_RS23365	0.75	-1.5
4,453,218	+		LU632_RS23365	0.77	+0.3
4,453,218	+		LU632_RS23365	0.77	+1.1
4,453,360	-				-1.3
4,453,360	-				-0.5
4,453,391	-				-2.0
4,453,491	-				+1.7
4,453,576	+				+0.3
4,453,577	-				-1.8
4,453,577	-				+0.7
4,453,580	+				-0.4
4,453,580	+				+0.3
4,453,580	+				-0.1
4,453,581	-				+0.1
4,453,624	+				+2.0
4,453,703	-		LU632_RS23370	0.14	-0.9
4,453,705	+		LU632_RS23370	0.15	-0.3
4,453,705	+		LU632_RS23370	0.15	+0.3
4,453,717	+		LU632_RS23370	0.16	+0.4
4,453,718	-		LU632_RS23370	0.16	+0.7
4,453,938	+		LU632_RS23370	0.36	-0.8
4,453,950	-		LU632_RS23370	0.37	+2.1
4,454,126	-		LU632_RS23370	0.53	-0.1
4,454,189	-		LU632_RS23370	0.59	+0.6
4,454,193	+		LU632_RS23370	0.59	-0.5
4,454,193	+		LU632_RS23370	0.59	-0.2
4,454,193	+		LU632_RS23370	0.59	-0.3
4,454,193	+		LU632_RS23370	0.59	-1.5
4,454,194	-		LU632_RS23370	0.59	+0.0
4,454,278	+		LU632_RS23370	0.67	+0.5
4,454,279	-		LU632_RS23370	0.67	-1.5
4,454,279	-		LU632_RS23370	0.67	-1.1
4,454,332	-		LU632_RS23370	0.72	-0.5
4,454,394	+		LU632_RS23370	0.77	+0.1
4,454,394	+		LU632_RS23370	0.77	-0.5
4,454,395	-		LU632_RS23370	0.77	-0.3
4,454,396	+		LU632_RS23370	0.77	-0.6
4,454,397	-		LU632_RS23370	0.77	-0.5