Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS22840

Experiment: plant=Melon; plant sample=MP1; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP1; plant location=NA
4,347,907	+		LU632_RS22830	0.77	+1.9
4,347,922	+		LU632_RS22830	0.78	+1.3
4,347,922	+		LU632_RS22830	0.78	-0.3
4,347,923	-		LU632_RS22830	0.78	-0.7
4,347,923	-		LU632_RS22830	0.78	-0.2
4,348,012	-		LU632_RS22830	0.85	-1.5
4,348,138	-				-0.7
4,348,193	+				+0.1
4,348,237	+				+0.5
4,348,237	+				-2.2
4,348,244	+				+0.3
4,348,270	-				-1.6
4,348,331	-				-1.3
4,348,331	-				+0.1
4,348,334	+				-0.1
4,348,335	-				+2.2
4,348,335	-				-0.8
4,348,335	-				-1.8
4,348,335	-				+0.5
4,348,335	-				-0.7
4,348,335	-				-1.0
4,348,370	-				-1.9
4,348,408	-				-0.6
4,348,408	-				+2.3
4,348,408	-				-0.2
4,348,408	-				-0.0
4,348,412	+				-0.1
4,348,412	+				-2.1
4,348,476	+		LU632_RS22835	0.24	+3.4
4,348,476	+		LU632_RS22835	0.24	-0.9
4,348,477	-		LU632_RS22835	0.24	-1.1
4,348,480	+		LU632_RS22835	0.25	+5.9
4,348,481	-		LU632_RS22835	0.25	+0.2
4,348,481	-		LU632_RS22835	0.25	-3.0
4,348,481	-		LU632_RS22835	0.25	+0.5
4,348,526	+		LU632_RS22835	0.36	-0.4
4,348,526	+		LU632_RS22835	0.36	+0.3
4,348,526	+		LU632_RS22835	0.36	+2.0
4,348,527	-		LU632_RS22835	0.36	-0.1
4,348,565	-		LU632_RS22835	0.45	-1.8
4,348,662	+		LU632_RS22835	0.67	+1.4
4,348,662	+		LU632_RS22835	0.67	-0.3
4,348,662	+		LU632_RS22835	0.67	+2.0
4,348,663	-		LU632_RS22835	0.67	+1.0
4,348,663	-		LU632_RS22835	0.67	+0.1
4,348,668	-		LU632_RS22835	0.68	+0.1
4,348,770	-				+1.1
4,348,785	+				-2.6
4,349,911	-				+2.7
4,349,948	-		LU632_RS22845	0.14	-0.7
4,349,948	-		LU632_RS22845	0.14	+1.1
4,349,960	-		LU632_RS22845	0.16	+0.1
4,349,960	-		LU632_RS22845	0.16	-0.7
4,350,031	-		LU632_RS22845	0.26	+1.9
4,350,031	-		LU632_RS22845	0.26	+0.7
4,350,146	+		LU632_RS22845	0.43	+0.5
4,350,146	+		LU632_RS22845	0.43	+1.0
4,350,172	-		LU632_RS22845	0.46	+0.1
4,350,173	+		LU632_RS22845	0.47	-0.9
4,350,173	+		LU632_RS22845	0.47	+0.7
4,350,173	+		LU632_RS22845	0.47	+0.5
4,350,308	+		LU632_RS22845	0.66	-1.2
4,350,308	+		LU632_RS22845	0.66	-1.8
4,350,308	+		LU632_RS22845	0.66	-1.3
4,350,309	-		LU632_RS22845	0.66	+0.0
4,350,309	-		LU632_RS22845	0.66	-0.3
4,350,309	-		LU632_RS22845	0.66	-1.1
4,350,342	-		LU632_RS22845	0.71	-2.7
4,350,378	-		LU632_RS22845	0.76	-0.5
4,350,432	+		LU632_RS22845	0.84	-1.9
4,350,438	+		LU632_RS22845	0.85	+0.5
4,350,438	+		LU632_RS22845	0.85	+2.2
4,350,438	+		LU632_RS22845	0.85	-1.8
4,350,438	+		LU632_RS22845	0.85	+1.0
4,350,439	-		LU632_RS22845	0.85	+0.6
4,350,439	-		LU632_RS22845	0.85	-1.7
4,350,460	-		LU632_RS22845	0.88	-1.7
4,350,460	-		LU632_RS22845	0.88	-0.2
4,350,812	-	rpe	LU632_RS22850	0.41	+0.1