Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS17240

Experiment: plant=Melon; plant sample=MP1; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP1; plant location=NA
3,239,363	-		LU632_RS17230	0.80	-0.6
3,239,460	+				+0.5
3,239,461	-				+0.7
3,239,478	+				-2.3
3,239,482	+				+0.4
3,239,482	+				+0.7
3,239,483	-				-0.9
3,239,519	+				+0.2
3,239,520	-				-0.3
3,239,520	-				-0.7
3,239,739	+		LU632_RS17235	0.34	-1.9
3,239,739	+		LU632_RS17235	0.34	+0.2
3,239,740	-		LU632_RS17235	0.34	+0.2
3,239,744	-		LU632_RS17235	0.34	-0.8
3,239,744	-		LU632_RS17235	0.34	-0.0
3,239,746	+		LU632_RS17235	0.35	+0.9
3,239,837	+		LU632_RS17235	0.45	+2.2
3,239,852	-		LU632_RS17235	0.46	-0.5
3,239,976	+		LU632_RS17235	0.60	-0.1
3,240,055	-		LU632_RS17235	0.69	-1.5
3,240,079	+		LU632_RS17235	0.71	-0.4
3,240,079	+		LU632_RS17235	0.71	-1.8
3,240,079	+		LU632_RS17235	0.71	-0.5
3,240,117	-		LU632_RS17235	0.75	-0.5
3,240,117	-		LU632_RS17235	0.75	+1.2
3,240,117	-		LU632_RS17235	0.75	+0.0
3,240,278	+				+1.5
3,240,278	+				-0.3
3,240,279	-				-0.1
3,240,279	-				+0.3
3,240,279	-				+0.0
3,240,413	-		LU632_RS17240	0.11	-1.1
3,240,417	+		LU632_RS17240	0.11	-1.9
3,240,421	-		LU632_RS17240	0.12	-1.8
3,240,539	-		LU632_RS17240	0.30	-2.0
3,240,655	+		LU632_RS17240	0.49	-0.6
3,241,151	+		LU632_RS17245	0.16	-1.3
3,241,151	+		LU632_RS17245	0.16	-0.9
3,241,452	-		LU632_RS17245	0.52	-0.4
3,241,540	-		LU632_RS17245	0.63	+1.0
3,241,717	+		LU632_RS17245	0.84	+0.8
3,241,900	+				-0.5
3,241,915	+				-1.2
3,241,963	-		LU632_RS17250	0.13	-0.3