Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS16160

Experiment: plant=Melon; plant sample=MP1; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP1; plant location=NA
3,054,503	+	phrB	LU632_RS16155	0.39	-1.2
3,054,553	+	phrB	LU632_RS16155	0.43	+2.0
3,054,637	-	phrB	LU632_RS16155	0.49	-0.6
3,054,841	+	phrB	LU632_RS16155	0.63	+0.7
3,054,842	-	phrB	LU632_RS16155	0.63	-0.7
3,054,899	-	phrB	LU632_RS16155	0.67	-0.9
3,054,912	-	phrB	LU632_RS16155	0.68	+1.2
3,054,918	+	phrB	LU632_RS16155	0.68	+0.9
3,054,918	+	phrB	LU632_RS16155	0.68	-0.7
3,054,918	+	phrB	LU632_RS16155	0.68	-0.0
3,054,918	+	phrB	LU632_RS16155	0.68	-0.5
3,054,918	+	phrB	LU632_RS16155	0.68	-2.2
3,054,918	+	phrB	LU632_RS16155	0.68	-0.4
3,054,919	-	phrB	LU632_RS16155	0.68	+0.4
3,054,919	-	phrB	LU632_RS16155	0.68	+3.3
3,054,989	-	phrB	LU632_RS16155	0.73	-1.2
3,055,050	+	phrB	LU632_RS16155	0.78	-0.5
3,055,056	+	phrB	LU632_RS16155	0.78	-0.2
3,055,056	+	phrB	LU632_RS16155	0.78	+0.4
3,055,057	-	phrB	LU632_RS16155	0.78	+0.2
3,055,060	+	phrB	LU632_RS16155	0.78	+0.9
3,055,060	+	phrB	LU632_RS16155	0.78	-1.2
3,055,061	-	phrB	LU632_RS16155	0.78	-0.3
3,055,061	-	phrB	LU632_RS16155	0.78	-0.2
3,055,063	-	phrB	LU632_RS16155	0.79	+0.1
3,055,079	-	phrB	LU632_RS16155	0.80	+0.0
3,055,082	-	phrB	LU632_RS16155	0.80	+0.8
3,055,148	+	phrB	LU632_RS16155	0.85	+1.4
3,055,201	-	phrB	LU632_RS16155	0.88	-0.2
3,055,261	+				-0.2
3,055,315	+				+0.4
3,055,315	+				-0.6
3,055,316	-				+1.4
3,055,316	-				-0.2
3,055,316	-				-1.6
3,055,476	+				-0.1
3,055,476	+				-1.4
3,055,476	+				-0.6
3,055,476	+				+0.4
3,055,476	+				-0.2
3,055,477	-				+0.8
3,055,477	-				-0.2
3,055,477	-				-3.2
3,055,531	+		LU632_RS16160	0.15	-0.9
3,055,532	-		LU632_RS16160	0.15	-0.8
3,055,642	+		LU632_RS16160	0.27	+0.5
3,055,642	+		LU632_RS16160	0.27	+0.7
3,055,680	+		LU632_RS16160	0.31	-0.1
3,055,681	-		LU632_RS16160	0.31	-3.1
3,055,727	+		LU632_RS16160	0.35	-0.5
3,055,737	+		LU632_RS16160	0.36	+1.4
3,055,848	+		LU632_RS16160	0.48	-0.6
3,055,933	+		LU632_RS16160	0.57	+0.2
3,056,039	+		LU632_RS16160	0.68	+0.5
3,056,040	-		LU632_RS16160	0.68	-0.1
3,056,040	-		LU632_RS16160	0.68	-0.1
3,056,157	-		LU632_RS16160	0.80	+0.4
3,056,234	-		LU632_RS16160	0.88	+0.4
3,056,351	-				-1.2
3,056,553	+				+0.4
3,056,553	+				-0.3
3,056,554	-				-0.9
3,056,584	+				+0.0
3,056,595	+				+1.5
3,056,595	+				+2.5
3,056,630	+				-2.1
3,056,630	+				-0.6
3,056,630	+				-0.4
3,056,633	-				+0.5
3,056,670	-				+0.9
3,056,684	-				-0.7
3,056,684	-				+0.5
3,056,697	+				-0.3
3,056,712	-				-0.6
3,056,783	+				-0.9
3,056,784	-				-0.9
3,056,784	-				+1.2
3,056,801	+				-1.2
3,056,801	+				-1.4
3,056,802	-				-0.3
3,056,803	+				+0.6
3,056,803	+				+0.1
3,056,803	+				-0.2
3,056,804	-				+1.2
3,056,804	-				+0.1
3,056,804	-				+0.0
3,056,806	-				-0.2
3,056,806	-				+0.8
3,056,806	-				-0.3
3,056,869	-				+0.6
3,056,903	-				+3.1
3,056,903	-				+1.6
3,056,903	-				+0.5
3,056,937	+				+1.5
3,057,004	+				+0.4
3,057,036	+				+0.3
3,057,036	+				+1.4
3,057,052	-				-1.3
3,057,052	-				-1.9
3,057,106	+				-2.3
3,057,107	-				+0.2
3,057,107	-				-0.7
3,057,107	-				+0.6
3,057,146	-				+0.9
3,057,146	-				-2.0
3,057,157	+				+1.6
3,057,162	+				-0.6
3,057,163	-				+2.7