Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS13045

Experiment: plant=Melon; plant sample=MP1; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP1; plant location=NA
2,488,426	+		LU632_RS13040	0.71	-0.1
2,488,426	+		LU632_RS13040	0.71	-1.9
2,488,426	+		LU632_RS13040	0.71	+1.0
2,488,426	+		LU632_RS13040	0.71	-1.4
2,488,426	+		LU632_RS13040	0.71	-0.1
2,488,426	+		LU632_RS13040	0.71	-0.2
2,488,426	+		LU632_RS13040	0.71	-0.0
2,488,427	-		LU632_RS13040	0.71	+0.1
2,488,427	-		LU632_RS13040	0.71	-1.1
2,488,427	-		LU632_RS13040	0.71	-1.6
2,488,427	-		LU632_RS13040	0.71	+1.2
2,488,427	-		LU632_RS13040	0.71	-1.4
2,488,427	-		LU632_RS13040	0.71	+0.6
2,488,427	-		LU632_RS13040	0.71	+1.5
2,488,427	-		LU632_RS13040	0.71	-0.1
2,488,427	-		LU632_RS13040	0.71	+1.7
2,488,511	+		LU632_RS13040	0.76	-1.2
2,488,558	+		LU632_RS13040	0.78	-0.9
2,488,559	-		LU632_RS13040	0.78	-2.0
2,488,561	+		LU632_RS13040	0.79	-1.7
2,488,562	-		LU632_RS13040	0.79	-2.0
2,488,562	-		LU632_RS13040	0.79	-0.7
2,488,766	+				+0.9
2,488,766	+				-0.4
2,488,767	-				+0.2
2,488,829	-				+0.3
2,488,853	+				-0.4
2,488,853	+				-2.0
2,488,854	-				+0.9
2,488,854	-				-0.9
2,488,944	+				+0.1
2,489,017	+				+1.7
2,489,018	-				+0.7
2,489,036	+				+1.2
2,489,036	+				+0.8
2,489,078	+				+0.8
2,489,105	+				-0.4
2,489,105	+				+0.2
2,489,228	+				+0.6
2,489,229	-				+0.1
2,489,231	-				+0.4
2,489,292	-				+0.4
2,489,320	+				-0.6
2,489,321	-				-0.6
2,489,353	+				+1.0
2,489,353	+				-1.7
2,489,384	+				+0.3
2,490,059	+		LU632_RS13045	0.54	+1.7
2,490,059	+		LU632_RS13045	0.54	+0.2
2,490,059	+		LU632_RS13045	0.54	+0.0
2,490,060	-		LU632_RS13045	0.54	-0.1
2,490,060	-		LU632_RS13045	0.54	+1.0
2,490,060	-		LU632_RS13045	0.54	+0.1
2,490,092	-		LU632_RS13045	0.56	+0.9
2,490,092	-		LU632_RS13045	0.56	-2.1
2,490,119	+		LU632_RS13045	0.59	-1.0
2,490,119	+		LU632_RS13045	0.59	+0.2
2,490,119	+		LU632_RS13045	0.59	-0.2
2,490,119	+		LU632_RS13045	0.59	+0.2
2,490,120	-		LU632_RS13045	0.59	+0.8
2,490,120	-		LU632_RS13045	0.59	-0.6
2,490,120	-		LU632_RS13045	0.59	-0.1
2,490,451	+		LU632_RS13045	0.86	+1.3
2,490,451	+		LU632_RS13045	0.86	+1.0
2,490,452	-		LU632_RS13045	0.86	+0.4
2,490,601	-				+1.6
2,490,601	-				+4.0
2,490,716	-				+0.3
2,490,719	-				+1.0
2,490,751	+				+1.8
2,490,780	+				+1.0
2,490,819	-		LU632_RS13050	0.14	+1.2
2,490,874	+		LU632_RS13050	0.40	-1.1
2,490,881	+		LU632_RS13050	0.43	-0.3
2,490,882	-		LU632_RS13050	0.44	+3.4
2,490,915	+		LU632_RS13050	0.60	+0.2
2,491,175	+				+0.2