Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS12390

Experiment: plant=Melon; plant sample=MP1; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP1; plant location=NA
2,354,564	+				+0.2
2,354,577	+				-0.1
2,354,577	+				+0.8
2,354,581	+				+0.0
2,354,640	-				-0.6
2,354,709	-		LU632_RS12385	0.10	+0.0
2,354,777	-		LU632_RS12385	0.27	-0.9
2,354,777	-		LU632_RS12385	0.27	+0.8
2,354,806	+		LU632_RS12385	0.34	-1.1
2,354,808	+		LU632_RS12385	0.34	+0.0
2,354,883	-		LU632_RS12385	0.52	+0.5
2,355,099	+				+0.0
2,355,293	-				-0.8
2,355,314	+				+0.6
2,355,314	+				-0.6
2,355,315	-				-2.5
2,355,315	-				-0.2
2,355,337	-				-1.4
2,355,383	-				-2.3
2,355,404	+				+0.7
2,355,404	+				-1.3
2,355,405	-				-0.4
2,355,405	-				-0.4
2,355,444	+				-0.8
2,355,495	+				-1.5
2,355,499	+				+1.3