Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS12235

Experiment: plant=Melon; plant sample=MP1; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP1; plant location=NA
2,322,626	+	ascB	LU632_RS12230	0.48	-1.4
2,322,626	+	ascB	LU632_RS12230	0.48	-0.3
2,322,626	+	ascB	LU632_RS12230	0.48	+0.2
2,322,626	+	ascB	LU632_RS12230	0.48	-0.3
2,322,626	+	ascB	LU632_RS12230	0.48	-1.2
2,322,627	-	ascB	LU632_RS12230	0.48	-2.2
2,322,627	-	ascB	LU632_RS12230	0.48	-1.2
2,322,627	-	ascB	LU632_RS12230	0.48	+0.5
2,322,627	-	ascB	LU632_RS12230	0.48	-0.4
2,322,649	-	ascB	LU632_RS12230	0.50	+0.3
2,322,662	+	ascB	LU632_RS12230	0.51	+0.8
2,322,751	-	ascB	LU632_RS12230	0.57	-0.4
2,322,752	+	ascB	LU632_RS12230	0.57	-0.5
2,322,753	-	ascB	LU632_RS12230	0.57	+0.9
2,322,753	-	ascB	LU632_RS12230	0.57	-1.5
2,322,753	-	ascB	LU632_RS12230	0.57	-0.7
2,322,781	+	ascB	LU632_RS12230	0.59	+2.4
2,322,781	+	ascB	LU632_RS12230	0.59	+0.2
2,322,782	-	ascB	LU632_RS12230	0.60	+0.8
2,322,782	-	ascB	LU632_RS12230	0.60	-0.9
2,322,853	-	ascB	LU632_RS12230	0.65	-0.1
2,322,914	+	ascB	LU632_RS12230	0.69	-0.0
2,322,915	-	ascB	LU632_RS12230	0.69	-2.8
2,322,923	+	ascB	LU632_RS12230	0.70	-1.4
2,323,000	-	ascB	LU632_RS12230	0.75	+0.2
2,323,079	+	ascB	LU632_RS12230	0.81	-1.1
2,323,166	+	ascB	LU632_RS12230	0.87	-1.4
2,323,166	+	ascB	LU632_RS12230	0.87	+0.1
2,323,166	+	ascB	LU632_RS12230	0.87	-2.3
2,323,166	+	ascB	LU632_RS12230	0.87	+0.4
2,323,166	+	ascB	LU632_RS12230	0.87	+1.0
2,323,167	-	ascB	LU632_RS12230	0.87	-0.2
2,323,236	+				-1.1
2,323,236	+				+1.2
2,323,236	+				+2.0
2,323,237	-				+0.6
2,323,284	-				-1.5
2,323,361	-				+0.4
2,323,361	-				+0.7
2,323,379	+				+0.3
2,323,380	-				+1.1
2,323,453	+				-0.1
2,324,581	-				-0.0
2,325,506	+				-0.7
2,325,516	+				-2.3
2,325,516	-				-0.9
2,325,551	+				-1.6