Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS09765

Experiment: plant=Melon; plant sample=MP1; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP1; plant location=NA
1,854,792	-				-0.5
1,854,792	-				+0.5
1,854,792	-				+0.1
1,854,903	-				+0.5
1,854,922	+				-0.2
1,855,115	-				+0.6
1,855,119	-				-0.2
1,855,142	+				+1.6
1,855,174	-				-0.0
1,855,176	+				+0.9
1,855,176	+				+0.6
1,855,176	+				-1.2
1,855,272	+		LU632_RS09765	0.13	+1.1
1,855,313	+		LU632_RS09765	0.17	-0.1
1,855,339	+		LU632_RS09765	0.19	+1.3
1,855,339	+		LU632_RS09765	0.19	+0.8
1,855,342	+		LU632_RS09765	0.19	-2.3
1,855,342	+		LU632_RS09765	0.19	+0.3
1,855,342	+		LU632_RS09765	0.19	+0.9
1,855,342	+		LU632_RS09765	0.19	+0.7
1,855,523	-		LU632_RS09765	0.35	+0.3
1,855,523	-		LU632_RS09765	0.35	+0.5
1,855,523	-		LU632_RS09765	0.35	-0.3
1,855,699	-		LU632_RS09765	0.50	-0.7
1,855,699	-		LU632_RS09765	0.50	-0.0
1,855,699	-		LU632_RS09765	0.50	-1.5
1,855,699	-		LU632_RS09765	0.50	-1.0
1,855,699	-		LU632_RS09765	0.50	+0.1
1,855,699	-		LU632_RS09765	0.50	-0.1
1,855,699	-		LU632_RS09765	0.50	+2.9
1,855,741	-		LU632_RS09765	0.54	-0.9
1,855,752	+		LU632_RS09765	0.55	-1.2
1,855,753	-		LU632_RS09765	0.55	-1.8
1,855,780	+		LU632_RS09765	0.57	+1.8
1,855,799	-		LU632_RS09765	0.59	+0.3
1,855,916	+		LU632_RS09765	0.69	-0.0
1,855,947	+		LU632_RS09765	0.72	-2.2
1,855,948	-		LU632_RS09765	0.72	-0.3
1,856,002	-		LU632_RS09765	0.77	+0.3
1,856,102	+		LU632_RS09765	0.85	-0.3
1,856,107	-		LU632_RS09765	0.86	-1.2
1,856,111	-		LU632_RS09765	0.86	-1.1
1,856,111	-		LU632_RS09765	0.86	+0.1
1,856,165	-				-0.9
1,856,176	-				+0.7
1,856,213	-				-0.9
1,856,226	-				+0.7
1,856,291	+				-1.0
1,856,305	+				+3.0
1,856,305	+				+0.1
1,856,305	+				-1.1
1,856,334	+				+2.4
1,856,390	+	pflA	LU632_RS09770	0.12	+0.7
1,856,390	+	pflA	LU632_RS09770	0.12	+0.8
1,856,391	-	pflA	LU632_RS09770	0.12	-1.2
1,856,391	-	pflA	LU632_RS09770	0.12	+0.7
1,856,415	+	pflA	LU632_RS09770	0.16	-0.5
1,856,537	+	pflA	LU632_RS09770	0.32	+0.3
1,856,573	+	pflA	LU632_RS09770	0.37	+0.1
1,856,574	-	pflA	LU632_RS09770	0.37	-0.5
1,856,605	+	pflA	LU632_RS09770	0.41	+0.2
1,856,662	+	pflA	LU632_RS09770	0.49	+0.1
1,856,663	-	pflA	LU632_RS09770	0.49	-0.3
1,856,663	-	pflA	LU632_RS09770	0.49	+0.7
1,856,663	-	pflA	LU632_RS09770	0.49	-0.3
1,856,680	+	pflA	LU632_RS09770	0.51	+0.0
1,856,681	-	pflA	LU632_RS09770	0.52	-0.2
1,856,681	-	pflA	LU632_RS09770	0.52	-1.2
1,856,737	-	pflA	LU632_RS09770	0.59	-1.5
1,856,797	-	pflA	LU632_RS09770	0.67	+0.3
1,856,841	+	pflA	LU632_RS09770	0.73	+2.1
1,856,842	-	pflA	LU632_RS09770	0.73	-0.1
1,856,860	+	pflA	LU632_RS09770	0.76	+0.5
1,856,861	-	pflA	LU632_RS09770	0.76	-1.9
1,856,872	+	pflA	LU632_RS09770	0.77	-0.7
1,856,872	+	pflA	LU632_RS09770	0.77	-0.0
1,856,968	+				-0.6
1,856,971	-				+0.3
1,857,047	+				-1.0
1,857,191	+				+0.1
1,857,192	-				+0.1
1,857,195	+				-1.7
1,857,195	+				-0.0
1,857,195	+				-1.3
1,857,196	-				+0.4
1,857,223	+				+1.7