Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS09640

Experiment: plant=Melon; plant sample=MP1; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP1; plant location=NA
1,826,462	+				-1.5
1,826,462	+				+0.5
1,826,463	-				+0.1
1,826,463	-				-0.5
1,826,463	-				-2.1
1,826,554	-				+0.8
1,826,555	+				-0.5
1,826,556	-				-0.7
1,826,582	-				-0.0
1,826,585	+				-0.9
1,826,585	+				-0.7
1,826,586	-				-1.3
1,826,586	-				-1.0
1,826,605	+				+0.9
1,826,626	+				-1.3
1,826,627	-				-1.9
1,826,627	-				+1.0
1,826,627	-				-2.0
1,826,822	+		LU632_RS09635	0.33	+0.1
1,826,823	-		LU632_RS09635	0.34	-1.4
1,826,823	-		LU632_RS09635	0.34	-2.1
1,827,046	-		LU632_RS09635	0.80	+0.5
1,827,190	-				-0.2
1,827,212	-				-0.3
1,827,213	+				+1.8
1,827,213	+				+0.6
1,827,570	+		LU632_RS09640	0.30	-2.2
1,827,750	-		LU632_RS09640	0.68	-0.2
1,827,750	-		LU632_RS09640	0.68	-1.8
1,827,836	+		LU632_RS09640	0.86	-0.5
1,828,079	-				+0.7
1,828,079	-				-1.3
1,828,127	+				+0.7
1,828,276	+				+1.6
1,828,279	+				+1.8
1,828,282	-				+0.7
1,828,512	-				+0.4
1,828,550	+				+0.2
1,828,551	-				+0.3
1,828,551	-				-1.2
1,828,728	+				+3.0
1,828,729	-				+0.4
1,828,755	+				-0.8
1,828,755	+				+2.3
1,828,783	-				-0.2
1,828,793	-				+0.8
1,828,873	+				+0.4
1,828,874	-				-0.0